Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   BC6307_RS04455 Genome accession   NZ_CP018866
Coordinates   927757..928713 (+) Length   318 a.a.
NCBI ID   WP_066416669.1    Uniprot ID   A0A223KMN1
Organism   Sutcliffiella cohnii strain DSM 6307     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 922757..933713
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BC6307_RS04435 (BC6307_04440) clpB 922780..925356 (+) 2577 WP_066416676.1 ATP-dependent chaperone ClpB -
  BC6307_RS04440 (BC6307_04445) - 925451..925633 (-) 183 WP_066416675.1 YjzD family protein -
  BC6307_RS25465 - 925749..925874 (+) 126 WP_268874275.1 hypothetical protein -
  BC6307_RS04445 (BC6307_04450) - 926061..926798 (+) 738 WP_066416674.1 alpha/beta fold hydrolase -
  BC6307_RS04450 (BC6307_04455) - 926904..927677 (+) 774 WP_066416673.1 hypothetical protein -
  BC6307_RS04455 (BC6307_04460) med 927757..928713 (+) 957 WP_066416669.1 BMP family ABC transporter substrate-binding protein Regulator
  BC6307_RS04460 (BC6307_04465) comZ 928725..928913 (+) 189 WP_066416667.1 ComZ family protein Regulator
  BC6307_RS04465 (BC6307_04470) - 928929..929183 (-) 255 WP_066416664.1 hypothetical protein -
  BC6307_RS04470 (BC6307_04475) - 929455..930387 (+) 933 WP_066416663.1 beta-ketoacyl-ACP synthase III -
  BC6307_RS04475 (BC6307_04480) fabF 930421..931656 (+) 1236 WP_066416662.1 beta-ketoacyl-ACP synthase II -
  BC6307_RS04480 (BC6307_04485) - 931835..932626 (+) 792 WP_066416661.1 DUF2268 domain-containing putative Zn-dependent protease -

Sequence

Protein


Download         Length: 318 a.a.        Molecular weight: 35819.36 Da        Isoelectric Point: 4.1829

>NTDB_id=211072 BC6307_RS04455 WP_066416669.1 927757..928713(+) (med) [Sutcliffiella cohnii strain DSM 6307]
MKIRTISFLFFLVLFLAGCGQVEQSEKLHKVGLLVPDTIHDQVWGTKGYKGLLKIQSEFNVDVFYMEGIEESASIKSAVK
EYDEKGINLIFGHGNQYAQVFNEIAKDYPHIHFVCFNAAVYGENVTSLNFNANAMGFFAGMVASHMTETNNIGVLAAFEW
QPEVDGYFEGAYFENPDIKVHIEFTQNWDDPELAVMLLNEMLENDVDIVYPAGDGYNIPVINTLKEKGLYAIGYVSDQSD
LGENTVLTSTIQHVPELYEIVARRFQDGQLTAGSLFFDFEDEVISLGAFSPLVDEEFQRSIENHITLYKQTGLLPNQQ

Nucleotide


Download         Length: 957 bp        

>NTDB_id=211072 BC6307_RS04455 WP_066416669.1 927757..928713(+) (med) [Sutcliffiella cohnii strain DSM 6307]
ATGAAAATAAGAACTATTTCATTCTTATTCTTTCTTGTCCTTTTTTTAGCAGGATGTGGACAAGTTGAACAATCAGAAAA
ATTACATAAGGTAGGCTTATTAGTTCCAGATACCATTCATGATCAAGTATGGGGGACAAAAGGGTACAAGGGATTGTTAA
AAATTCAATCCGAATTTAACGTAGATGTATTTTATATGGAAGGGATAGAGGAATCAGCTTCTATAAAAAGTGCAGTAAAG
GAATATGATGAAAAAGGAATTAATCTTATATTCGGTCACGGCAATCAATATGCACAAGTGTTTAATGAAATAGCGAAAGA
TTACCCACATATTCATTTTGTATGCTTTAATGCAGCAGTATATGGTGAAAATGTAACGTCCTTAAATTTTAATGCTAATG
CAATGGGCTTTTTTGCCGGGATGGTAGCTAGTCATATGACAGAAACGAATAATATCGGTGTGCTTGCTGCGTTTGAATGG
CAGCCAGAGGTAGACGGGTATTTCGAAGGTGCTTATTTTGAAAATCCAGATATAAAAGTTCATATCGAATTCACTCAAAA
TTGGGACGACCCAGAATTAGCGGTAATGTTGCTTAATGAAATGTTAGAAAATGATGTTGATATTGTTTATCCAGCAGGTG
ATGGATATAATATTCCTGTAATTAATACGTTAAAAGAAAAAGGCTTATACGCAATTGGATACGTCTCAGATCAATCAGAT
TTAGGAGAAAATACAGTTTTAACGAGTACTATTCAACATGTACCGGAGCTTTACGAAATAGTTGCACGACGTTTTCAAGA
TGGGCAGTTAACTGCCGGCTCTCTATTTTTTGATTTTGAGGACGAAGTAATATCACTAGGTGCATTTAGCCCGTTAGTGG
ATGAAGAGTTCCAACGATCTATTGAAAATCATATTACATTATATAAACAAACAGGTCTACTACCAAACCAACAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(30-315)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A223KMN1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

52.848

99.371

0.525

Multiple sequence alignment