Detailed information
Bioinformatically predicted
Overview
| Name | hapR | Type | Regulator |
| Locus tag | BSQ33_RS11545 | Genome accession | NZ_CP018835 |
| Coordinates | 2535305..2535925 (-) | Length | 206 a.a. |
| NCBI ID | WP_021020566.1 | Uniprot ID | A0A1M5CKH9 |
| Organism | Vibrio gazogenes strain ATCC 43942 | ||
| Function | regulate expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2530305..2540925
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSQ33_RS11535 (BSQ33_11575) | aceF | 2531637..2533508 (+) | 1872 | WP_088134134.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| BSQ33_RS11540 (BSQ33_11580) | lpdA | 2533754..2535178 (+) | 1425 | WP_021020565.1 | dihydrolipoyl dehydrogenase | - |
| BSQ33_RS11545 (BSQ33_11585) | hapR | 2535305..2535925 (-) | 621 | WP_021020566.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| BSQ33_RS11550 (BSQ33_11590) | hpt | 2536350..2536883 (+) | 534 | WP_021020567.1 | hypoxanthine phosphoribosyltransferase | - |
| BSQ33_RS11555 (BSQ33_11595) | can | 2536981..2537649 (-) | 669 | WP_021020568.1 | carbonate dehydratase | - |
| BSQ33_RS11560 (BSQ33_11600) | - | 2538071..2539048 (+) | 978 | WP_088134135.1 | ABC transporter ATP-binding protein | - |
| BSQ33_RS11565 (BSQ33_11605) | - | 2539062..2539832 (+) | 771 | WP_021020570.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 24135.49 Da Isoelectric Point: 6.2222
>NTDB_id=210785 BSQ33_RS11545 WP_021020566.1 2535305..2535925(-) (hapR) [Vibrio gazogenes strain ATCC 43942]
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVHQFSNFL
ADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSASTRDEVWPLFVSTNHTNRLLVKNMFTNAIERGDVSDHYDP
EHLVTLFLGIFYSLFVQVNRLQDQKEIDDLVNSYLDMLCIYNNRRA
MDASIEKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDDVLTHVVHQFSNFL
ADNIDVDSYIKDNLYHLTHKMTKLVFEDCHWLKVWFEWSASTRDEVWPLFVSTNHTNRLLVKNMFTNAIERGDVSDHYDP
EHLVTLFLGIFYSLFVQVNRLQDQKEIDDLVNSYLDMLCIYNNRRA
Nucleotide
Download Length: 621 bp
>NTDB_id=210785 BSQ33_RS11545 WP_021020566.1 2535305..2535925(-) (hapR) [Vibrio gazogenes strain ATCC 43942]
ATGGACGCTTCAATAGAAAAACGCCCTCGTACACGATTATCACCTCAGAAACGTAAACTTCAGCTAATGGAAATTGCGCT
TGAAGTCTTCGCCAAACGAGGTATCGGACGTGGTGGACATGCAGATATCGCTGAAATTGCTCAGGTATCTGTCGCAACTG
TATTTAACTATTTCCCAACTCGTGAGGATTTAGTTGATGATGTTCTCACTCACGTCGTTCACCAATTCTCAAACTTCCTC
GCAGACAACATCGATGTCGATAGTTATATCAAAGATAACCTCTATCATCTGACACACAAAATGACAAAACTGGTCTTTGA
AGATTGTCATTGGCTGAAAGTGTGGTTTGAATGGAGTGCATCGACTCGCGACGAAGTCTGGCCGTTATTCGTATCGACCA
ACCATACAAACCGTCTGTTGGTAAAAAATATGTTTACCAATGCAATCGAACGCGGCGATGTTAGCGATCATTATGATCCT
GAACATTTAGTCACGTTGTTCCTCGGAATTTTCTATTCCCTGTTTGTGCAAGTGAACCGTTTACAAGATCAAAAAGAAAT
CGATGATCTCGTGAACAGCTACTTGGACATGTTATGCATTTATAACAACCGTCGGGCTTAA
ATGGACGCTTCAATAGAAAAACGCCCTCGTACACGATTATCACCTCAGAAACGTAAACTTCAGCTAATGGAAATTGCGCT
TGAAGTCTTCGCCAAACGAGGTATCGGACGTGGTGGACATGCAGATATCGCTGAAATTGCTCAGGTATCTGTCGCAACTG
TATTTAACTATTTCCCAACTCGTGAGGATTTAGTTGATGATGTTCTCACTCACGTCGTTCACCAATTCTCAAACTTCCTC
GCAGACAACATCGATGTCGATAGTTATATCAAAGATAACCTCTATCATCTGACACACAAAATGACAAAACTGGTCTTTGA
AGATTGTCATTGGCTGAAAGTGTGGTTTGAATGGAGTGCATCGACTCGCGACGAAGTCTGGCCGTTATTCGTATCGACCA
ACCATACAAACCGTCTGTTGGTAAAAAATATGTTTACCAATGCAATCGAACGCGGCGATGTTAGCGATCATTATGATCCT
GAACATTTAGTCACGTTGTTCCTCGGAATTTTCTATTCCCTGTTTGTGCAAGTGAACCGTTTACAAGATCAAAAAGAAAT
CGATGATCTCGTGAACAGCTACTTGGACATGTTATGCATTTATAACAACCGTCGGGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| hapR | Vibrio cholerae C6706 |
73.892 |
98.544 |
0.728 |
| hapR | Vibrio cholerae strain A1552 |
73.892 |
98.544 |
0.728 |
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
75.377 |
96.602 |
0.728 |