Detailed information NTG0021078

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HD_RS07725
• Genome accession: NC_002940
• Coordinates: 1586846..1587988 (-)
• Length: 380 a.a.
• NCBI ID: WP_010945645.1
• Uniprot ID: -
• Organism: [Haemophilus] ducreyi 35000HP
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1581846..1592988

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HD_RS07700 (HD1882)	rplA	1582146..1582835 (-)	690	WP_010945641.1	50S ribosomal protein L1	-
HD_RS07705 (HD1884)	rplK	1582840..1583268 (-)	429	WP_005599211.1	50S ribosomal protein L11	-
HD_RS07710 (HD1885)	nusG	1583456..1584019 (-)	564	WP_010945642.1	transcription termination/antitermination protein NusG	-
HD_RS07715 (HD1886)	secE	1584021..1584437 (-)	417	WP_010945643.1	preprotein translocase subunit SecE	-
HD_RS07720 (HD1887)	-	1584727..1586736 (+)	2010	WP_010945644.1	OPT family oligopeptide transporter	-
HD_RS07725 (HD1888)	dprA	1586846..1587988 (-)	1143	WP_010945645.1	DNA-processing protein DprA	Machinery gene
HD_RS07730 (HD1889)	def	1588178..1588693 (+)	516	WP_010945646.1	peptide deformylase	-
HD_RS07735 (HD1890)	rfaD	1588825..1589766 (+)	942	WP_010945647.1	ADP-glyceromanno-heptose 6-epimerase	-
HD_RS07740 (HD1891)	-	1589862..1590194 (-)	333	WP_010945648.1	DMT family transporter	-
HD_RS07745 (HD1892)	-	1590650..1590940 (-)	291	WP_041603730.1	YfcZ/YiiS family protein	-
HD_RS08790 (HD1893)	-	1591072..1591368 (-)	297	WP_010945650.1	hypothetical protein	-

Sequence

Protein

• Length: 380 a.a.
• Molecular weight: 42165.79 Da
• Isoelectric Point: 6.3418

>NTDB_id=21078 HD_RS07725 WP_010945645.1 1586846..1587988(-) (dprA) [[Haemophilus] ducreyi 35000HP]
MKQLALLKLLQIPQLGPQRIARLLNQIDFAEFCQYSKKELQQMGWNDKQIQCWFQPEMRWIDRAITWAEQPNQRLVTLFD
KDYPFLLQQISTAPPLLFVRGSVASLTLPQIAIVGSRDYSPYGEYWASYFTRELIEQGFAVTSGLAIGIDGFCHKQAVKQ
QAVTIAVLGSGLDQVYPARHKKLAEQIIANGGALVSEFFPDQPPLAEHFPRRNRIISGLSLGTLVVEATINSGSLITARY
ALEQGREVFALPNTAQNPYAVGCHQLIKEGAILTESIADILQAIQHQYRPSAKLVNANSMNNPPNIANQQLTIPLTDKIL
PDLTACQQQIMQNISFTPIAIDDLAKATDIAVEILLVELLGLELLGMIKQVCGGYVVTQA

Nucleotide

• Length: 1143 bp

>NTDB_id=21078 HD_RS07725 WP_010945645.1 1586846..1587988(-) (dprA) [[Haemophilus] ducreyi 35000HP]
ATGAAACAATTGGCATTACTTAAATTATTGCAGATTCCACAACTAGGCCCACAGCGGATTGCGCGTTTATTAAATCAAAT
TGATTTTGCTGAATTTTGTCAATATAGCAAAAAAGAACTACAGCAAATGGGATGGAATGACAAACAAATTCAATGTTGGT
TTCAGCCTGAAATGCGTTGGATTGATCGGGCAATAACTTGGGCAGAACAGCCAAATCAACGGCTTGTGACACTGTTTGAT
AAAGATTATCCCTTTTTATTACAGCAAATTAGCACTGCACCACCATTATTATTTGTGCGTGGTTCGGTGGCTAGCTTAAC
TCTGCCACAAATTGCGATTGTTGGCAGTCGTGATTATTCTCCTTATGGAGAGTATTGGGCCTCTTATTTTACACGAGAAT
TAATTGAACAAGGTTTTGCGGTAACAAGTGGCTTGGCGATTGGCATTGATGGTTTTTGTCATAAACAAGCAGTAAAACAG
CAAGCGGTGACTATTGCTGTATTAGGTAGCGGTTTAGATCAAGTTTATCCCGCACGTCATAAAAAATTAGCAGAACAAAT
TATTGCGAATGGTGGAGCATTAGTGTCAGAGTTTTTTCCCGATCAACCCCCGCTAGCGGAACATTTTCCTCGTCGAAATC
GTATTATTAGTGGCTTGTCACTTGGTACTTTAGTGGTAGAAGCAACGATTAATAGTGGCTCATTAATTACCGCACGCTAT
GCTTTAGAGCAAGGGCGAGAGGTCTTTGCTTTGCCGAATACTGCACAAAATCCTTATGCAGTGGGTTGCCATCAATTGAT
TAAAGAAGGCGCTATTTTAACCGAGTCGATAGCGGATATTTTACAAGCGATTCAGCATCAATATCGACCATCAGCTAAGT
TAGTTAATGCAAATAGCATGAATAATCCCCCTAATATTGCTAATCAGCAATTGACAATACCGTTAACGGATAAAATATTG
CCGGATTTGACCGCTTGTCAGCAACAGATTATGCAAAATATCAGTTTTACGCCAATTGCAATAGATGATTTAGCCAAAGC
AACGGATATAGCGGTCGAAATATTATTAGTTGAGCTACTTGGTTTAGAATTATTAGGTATGATTAAACAGGTTTGTGGGG
GATATGTAGTGACACAGGCATAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (320-374)

• DNA recombination-mediator protein A (DNA_processg_A) (69-273)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Glaesserella parasuis strain SC1401	68.365	98.158	0.671
dprA	Vibrio campbellii strain DS40M4	45.479	98.947	0.45
dprA	Haemophilus influenzae Rd KW20	49.563	90.263	0.447
dprA	Vibrio cholerae strain A1552	42.4	98.684	0.418
dprA	Legionella pneumophila strain ERS1305867	38.564	98.947	0.382