Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   Cj0190c Genome accession   NC_002163
Coordinates   185470..186975 (-) Length   501 a.a.
NCBI ID   YP_002343648.1    Uniprot ID   Q0PBU9
Organism   Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819     
Function   interact with DprA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 180470..191975
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Cj0184c - 180702..181856 (-) 1155 YP_002343642.1 serine/threonine protein phosphatase -
  Cj0186c - 182068..182787 (-) 720 YP_002343644.1 TerC family integral membrane protein -
  Cj0187c purN 182859..183425 (-) 567 YP_002343645.1 phosphoribosylglycinamide formyltransferase -
  Cj0188c - 183416..184786 (-) 1371 YP_002343646.1 kinase -
  Cj0189c - 184770..185468 (-) 699 YP_002343647.1 hypothetical protein -
  Cj0190c comM 185470..186975 (-) 1506 YP_002343648.1 hypothetical protein Machinery gene
  Cj0191c def 186972..187499 (-) 528 YP_002343649.1 peptide deformylase -
  Cj0192c clpP 187535..188119 (-) 585 YP_002343650.1 ATP-dependent Clp protease proteolytic subunit Unclear
  Cj0193c tig 188119..189453 (-) 1335 YP_002343651.1 trigger factor -
  Cj0194 folE 189596..190168 (+) 573 YP_002343652.1 GTP cyclohydrolase I -
  Cj0195 fliI 190168..191553 (+) 1386 YP_002343653.1 flagellum-specific ATP synthase -

Sequence

Protein


Download         Length: 501 a.a.        Molecular weight: 56422.44 Da        Isoelectric Point: 8.7417

>NTDB_id=21061 Cj0190c YP_002343648.1 185470..186975(-) (comM) [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
MKKLKCISFHEGLDIIEVESTFTRGLPNLSIVGLASTAIKESVERIKATLLSCDFAFPAKKITINLSPSGIPKKGSHFDL
AIALLILLQNEELDDFFVVGELGLDGSIKSTNELFSLLLFLSAKIKKAKIVVPKSIAQKASMIPNLEVYGLENLNEAIEF
FKEKNYENFRFSHNHPLFANPLQIENEIFLQNMDFKLDFKDIKGQEKAKRACMIAALGMHNILFEGSPGSGKSMCAKRLV
YIMPPQSLSEILMQNAYMSLDSKDCEFTKIRAFRHPHHTSTRASIFGGGTKNARIGEVALANGGVLFFDEFPHFNKQIIE
SLREPLEDHKIHISRVNSKITYETKFSFIAAQNPCPCGNLFSKNLSCVCSENEIKKYKNHISAPIMDRIDLYVAMDEISK
DDKTSISSKEMSEKILQAFIFSKKRGQKEFNGKLKDEDLSRFCVLEKDAKDTLDLAISRYNLSLRSLNKILKVSRSIADL
EQSLNISKTHILEALSFRARN

Nucleotide


Download         Length: 1506 bp        

>NTDB_id=21061 Cj0190c YP_002343648.1 185470..186975(-) (comM) [Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819]
ATGAAAAAACTAAAGTGCATAAGCTTTCATGAAGGCTTAGACATTATAGAGGTAGAATCCACTTTTACAAGAGGTTTGCC
AAATTTAAGCATAGTAGGGCTTGCAAGTACAGCGATTAAGGAAAGTGTCGAACGCATCAAAGCCACACTTTTAAGTTGTG
ATTTTGCTTTTCCTGCTAAAAAAATCACTATCAATCTTAGTCCTTCAGGCATCCCAAAAAAGGGATCGCATTTTGATTTG
GCTATCGCTTTATTAATCCTTTTGCAAAATGAAGAATTAGATGACTTTTTTGTAGTAGGAGAATTAGGACTTGATGGAAG
TATTAAAAGCACAAATGAGCTTTTTTCTTTGCTTTTGTTTCTCTCTGCTAAAATTAAAAAAGCTAAGATCGTTGTTCCAA
AAAGTATAGCACAAAAAGCTTCCATGATACCAAATTTAGAGGTTTATGGACTTGAAAATTTAAATGAAGCAATAGAGTTT
TTTAAAGAAAAAAATTATGAAAATTTTCGTTTTTCTCACAATCATCCTTTATTTGCAAACCCTTTACAAATAGAAAATGA
AATTTTTTTACAAAATATGGATTTTAAACTTGATTTTAAAGACATCAAAGGGCAGGAAAAAGCCAAAAGAGCTTGTATGA
TAGCTGCTTTAGGTATGCATAATATCTTATTTGAAGGAAGTCCAGGAAGTGGTAAAAGCATGTGTGCTAAACGCCTTGTT
TATATCATGCCCCCTCAAAGTTTAAGTGAAATTTTAATGCAAAATGCTTATATGTCTTTAGATTCAAAAGATTGTGAATT
TACTAAAATTCGTGCTTTTCGTCATCCTCATCATACTTCTACAAGAGCAAGTATTTTTGGCGGAGGAACAAAAAATGCCA
GAATTGGAGAAGTAGCACTTGCAAATGGTGGAGTATTGTTTTTTGATGAATTTCCACATTTTAACAAGCAAATCATAGAG
AGTTTAAGAGAACCTTTAGAGGATCATAAAATTCATATTTCAAGAGTAAATTCTAAAATCACTTATGAAACAAAATTTAG
CTTTATAGCTGCCCAAAATCCTTGTCCTTGTGGAAATTTATTCTCCAAAAATCTTTCTTGTGTTTGTAGTGAAAATGAGA
TTAAAAAATACAAAAATCACATTTCAGCTCCTATTATGGATAGGATTGATCTTTATGTAGCTATGGATGAGATCAGCAAG
GATGATAAAACGAGTATAAGTTCTAAAGAAATGAGTGAAAAAATTTTACAAGCTTTTATTTTTAGTAAAAAACGGGGGCA
AAAAGAATTTAATGGGAAATTAAAAGATGAAGATTTAAGTCGTTTTTGTGTATTGGAAAAAGATGCCAAAGATACGCTAG
ATTTAGCAATTTCACGTTATAATCTTTCTTTGCGATCGCTTAATAAAATTTTAAAAGTTTCAAGAAGTATAGCGGATTTA
GAACAAAGTCTTAATATTAGCAAAACCCATATTTTAGAAGCTTTAAGCTTTAGAGCAAGGAATTAA

Domains

Predicted by InterProScan.

Subunit ChlI of Mg-chelatase (ChlI)

(18-134)

Magnesium chelatase, subunit ChlI (Mg_chelatase)

(198-400)

Magnesium chelatase, subunit ChlI C-terminal (Mg_chelatase_C)

(407-498)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q0PBU9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Helicobacter pylori 26695

47.495

99.601

0.473

Multiple sequence alignment