Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CSUIS_RS03900 | Genome accession | NZ_CP018789 |
| Coordinates | 766787..767158 (+) | Length | 123 a.a. |
| NCBI ID | WP_086297238.1 | Uniprot ID | A0A1X9SWC3 |
| Organism | Campylobacter porcelli strain RM6137 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 761787..772158
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSUIS_RS03880 (CSUIS_0775) | - | 763110..763922 (-) | 813 | WP_086297228.1 | HDOD domain-containing protein | - |
| CSUIS_RS03885 (CSUIS_0776) | ilvC | 764066..765088 (+) | 1023 | WP_086297231.1 | ketol-acid reductoisomerase | - |
| CSUIS_RS03890 (CSUIS_0777) | - | 765089..766042 (+) | 954 | WP_086297233.1 | divergent polysaccharide deacetylase family protein | - |
| CSUIS_RS03895 (CSUIS_0778) | dprA | 766026..766790 (+) | 765 | WP_086297236.1 | DNA-processing protein DprA | Machinery gene |
| CSUIS_RS03900 (CSUIS_0779) | dprB | 766787..767158 (+) | 372 | WP_086297238.1 | Holliday junction resolvase RuvX | Machinery gene |
| CSUIS_RS03905 (CSUIS_0780) | - | 767155..768021 (+) | 867 | WP_086297240.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| CSUIS_RS03910 (CSUIS_0781) | purU | 768112..768945 (+) | 834 | WP_192940222.1 | formyltetrahydrofolate deformylase | - |
| CSUIS_RS03915 (CSUIS_0782) | - | 768945..769433 (+) | 489 | WP_086297244.1 | tRNA (cytidine(34)-2'-O)-methyltransferase | - |
| CSUIS_RS03920 (CSUIS_0783) | - | 769421..770710 (+) | 1290 | WP_086297245.1 | endonuclease/exonuclease/phosphatase family protein | - |
| CSUIS_RS03925 (CSUIS_0784) | - | 770703..770888 (+) | 186 | WP_086236760.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13607.81 Da Isoelectric Point: 8.0008
>NTDB_id=210232 CSUIS_RS03900 WP_086297238.1 766787..767158(+) (dprB) [Campylobacter porcelli strain RM6137]
MIVAIDVGLKRIGVAISLEGKIAIPSTPILRKNRNQAARDVSDMLKEKGAKILVVGLPKGGSSEAEMERRIKHFISLLEF
DGEICYQDESYSSVEASELVSNKRDGKFDSIAAMIILERFLNR
MIVAIDVGLKRIGVAISLEGKIAIPSTPILRKNRNQAARDVSDMLKEKGAKILVVGLPKGGSSEAEMERRIKHFISLLEF
DGEICYQDESYSSVEASELVSNKRDGKFDSIAAMIILERFLNR
Nucleotide
Download Length: 372 bp
>NTDB_id=210232 CSUIS_RS03900 WP_086297238.1 766787..767158(+) (dprB) [Campylobacter porcelli strain RM6137]
ATGATAGTTGCTATTGATGTTGGACTTAAACGAATTGGCGTAGCTATAAGCCTAGAAGGCAAAATCGCTATCCCAAGCAC
CCCAATCTTGCGTAAAAATCGCAATCAAGCCGCAAGAGATGTAAGCGATATGCTAAAGGAAAAAGGGGCAAAAATCTTAG
TCGTTGGCTTGCCAAAGGGTGGAAGCTCTGAGGCTGAAATGGAGCGTAGGATTAAGCATTTTATATCGCTTTTAGAGTTT
GATGGAGAGATTTGTTATCAAGATGAATCTTATAGTAGCGTTGAGGCTAGTGAGCTAGTAAGCAATAAGCGAGATGGCAA
ATTTGATAGCATAGCAGCGATGATAATTTTAGAGAGATTTTTAAATAGATGA
ATGATAGTTGCTATTGATGTTGGACTTAAACGAATTGGCGTAGCTATAAGCCTAGAAGGCAAAATCGCTATCCCAAGCAC
CCCAATCTTGCGTAAAAATCGCAATCAAGCCGCAAGAGATGTAAGCGATATGCTAAAGGAAAAAGGGGCAAAAATCTTAG
TCGTTGGCTTGCCAAAGGGTGGAAGCTCTGAGGCTGAAATGGAGCGTAGGATTAAGCATTTTATATCGCTTTTAGAGTTT
GATGGAGAGATTTGTTATCAAGATGAATCTTATAGTAGCGTTGAGGCTAGTGAGCTAGTAAGCAATAAGCGAGATGGCAA
ATTTGATAGCATAGCAGCGATGATAATTTTAGAGAGATTTTTAAATAGATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
50 |
100 |
0.537 |