Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | BG259_RS11030 | Genome accession | NZ_CP018680 |
| Coordinates | 2300905..2301498 (-) | Length | 197 a.a. |
| NCBI ID | WP_005451500.1 | Uniprot ID | A0A9X3S2A2 |
| Organism | Vibrio harveyi strain QT520 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2295905..2306498
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG259_RS11010 (BG259_11010) | aroB | 2296774..2297874 (-) | 1101 | WP_074050875.1 | 3-dehydroquinate synthase | - |
| BG259_RS11015 (BG259_11015) | aroK | 2297906..2298424 (-) | 519 | WP_005451507.1 | shikimate kinase AroK | - |
| BG259_RS11020 (BG259_11020) | pilQ | 2298614..2300365 (-) | 1752 | WP_005451505.1 | type IV pilus secretin PilQ | Machinery gene |
| BG259_RS11025 (BG259_11025) | pilP | 2300400..2300915 (-) | 516 | WP_005451501.1 | pilus assembly protein PilP | Machinery gene |
| BG259_RS11030 (BG259_11030) | pilO | 2300905..2301498 (-) | 594 | WP_005451500.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BG259_RS11035 (BG259_11035) | pilN | 2301491..2302066 (-) | 576 | WP_005451499.1 | PilN domain-containing protein | Machinery gene |
| BG259_RS11040 (BG259_11040) | pilM | 2302050..2303066 (-) | 1017 | WP_074050876.1 | type IV pilus assembly protein PilM | Machinery gene |
| BG259_RS11045 (BG259_11045) | - | 2303245..2305815 (+) | 2571 | WP_074050877.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23020.58 Da Isoelectric Point: 4.8068
>NTDB_id=209645 BG259_RS11030 WP_005451500.1 2300905..2301498(-) (pilO) [Vibrio harveyi strain QT520]
MVNWQDLEMDEIAEWPLVPQIVVILLLVVLIQGLGYWFYLKPEQEQLNNLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKQSEHFLYRLPLDIELTGDFHDIGRFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVKANTYQFKPEVKKDEK
MVNWQDLEMDEIAEWPLVPQIVVILLLVVLIQGLGYWFYLKPEQEQLNNLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKQSEHFLYRLPLDIELTGDFHDIGRFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVKANTYQFKPEVKKDEK
Nucleotide
Download Length: 594 bp
>NTDB_id=209645 BG259_RS11030 WP_005451500.1 2300905..2301498(-) (pilO) [Vibrio harveyi strain QT520]
ATGGTTAATTGGCAAGATCTAGAAATGGATGAGATCGCTGAGTGGCCATTGGTGCCTCAGATAGTAGTGATCTTGTTGTT
AGTTGTGCTGATTCAAGGCCTTGGTTATTGGTTTTATTTAAAGCCAGAGCAAGAACAGCTGAATAACCTTATTCAAGAAG
AACAAACCTTAAAAGTTGCGTTACGGATCAAAGCGAACAAAGTCGCTGCTTTGCCTCAATTGCAATCGCAACTTGATGAG
CTTACTACTCGATACGAATTGCTACTGCAACAACTGCCTGCACAGAAAGAGCTGGCAACCATGTTGGCTTCGGTGAATGA
ACTCGGAATTGATAATAAGTTGACGTTCACCCGAATCGACTGGGGTGATAAGCAATCAGAACACTTCCTTTATCGTTTAC
CGCTCGACATTGAGTTGACAGGGGATTTTCATGATATCGGTCGTTTCTCCCAAGCGATTGCGACGTTGCCACGCATCATC
ACTTTTAAAGACGTGACTTGGCAGCGTGTCAGCCAAGAGAGTGAAACTCTGCACTTTCGTGTGAAAGCAAACACTTACCA
GTTCAAACCAGAGGTGAAGAAAGATGAGAAGTAA
ATGGTTAATTGGCAAGATCTAGAAATGGATGAGATCGCTGAGTGGCCATTGGTGCCTCAGATAGTAGTGATCTTGTTGTT
AGTTGTGCTGATTCAAGGCCTTGGTTATTGGTTTTATTTAAAGCCAGAGCAAGAACAGCTGAATAACCTTATTCAAGAAG
AACAAACCTTAAAAGTTGCGTTACGGATCAAAGCGAACAAAGTCGCTGCTTTGCCTCAATTGCAATCGCAACTTGATGAG
CTTACTACTCGATACGAATTGCTACTGCAACAACTGCCTGCACAGAAAGAGCTGGCAACCATGTTGGCTTCGGTGAATGA
ACTCGGAATTGATAATAAGTTGACGTTCACCCGAATCGACTGGGGTGATAAGCAATCAGAACACTTCCTTTATCGTTTAC
CGCTCGACATTGAGTTGACAGGGGATTTTCATGATATCGGTCGTTTCTCCCAAGCGATTGCGACGTTGCCACGCATCATC
ACTTTTAAAGACGTGACTTGGCAGCGTGTCAGCCAAGAGAGTGAAACTCTGCACTTTCGTGTGAAAGCAAACACTTACCA
GTTCAAACCAGAGGTGAAGAAAGATGAGAAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
93.158 |
96.447 |
0.898 |
| pilO | Vibrio cholerae strain A1552 |
71.066 |
100 |
0.711 |