Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | AUO97_RS15375 | Genome accession | NZ_CP018664 |
| Coordinates | 3231496..3231876 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836915.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain ATCC 17978-VU | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3226496..3236876
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AUO97_RS15345 (AUO97_15345) | kdsB | 3227399..3228160 (+) | 762 | WP_000680696.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| AUO97_RS15350 (AUO97_15350) | - | 3228172..3229152 (+) | 981 | WP_001075412.1 | DNA polymerase III subunit delta' | - |
| AUO97_RS15355 (AUO97_15355) | - | 3229164..3229505 (+) | 342 | WP_001183025.1 | PilZ domain-containing protein | - |
| AUO97_RS15360 (AUO97_15360) | - | 3229523..3230296 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| AUO97_RS15365 (AUO97_15365) | - | 3230334..3230942 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| AUO97_RS15370 (AUO97_15370) | - | 3230952..3231506 (+) | 555 | WP_000841375.1 | type II secretion system protein | - |
| AUO97_RS15375 (AUO97_15375) | xcpV | 3231496..3231876 (+) | 381 | WP_000836915.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| AUO97_RS15380 (AUO97_15380) | xcpW | 3231876..3232577 (+) | 702 | WP_000594584.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| AUO97_RS15385 (AUO97_15385) | gspK | 3232577..3233536 (+) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| AUO97_RS15390 (AUO97_15390) | - | 3233766..3234362 (+) | 597 | WP_000908453.1 | 6-carboxytetrahydropterin synthase | - |
| AUO97_RS15395 (AUO97_15395) | ung | 3234413..3235126 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| AUO97_RS15400 (AUO97_15400) | - | 3235123..3236247 (+) | 1125 | WP_000982062.1 | enoyl-CoA hydratase/isomerase family protein | - |
| AUO97_RS15405 (AUO97_15405) | tadA | 3236254..3236757 (+) | 504 | WP_000033177.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13957.17 Da Isoelectric Point: 9.8004
>NTDB_id=209542 AUO97_RS15375 WP_000836915.1 3231496..3231876(+) (xcpV) [Acinetobacter baumannii strain ATCC 17978-VU]
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVATQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGEIWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=209542 AUO97_RS15375 WP_000836915.1 3231496..3231876(+) (xcpV) [Acinetobacter baumannii strain ATCC 17978-VU]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAACGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAGGTAACTTCCCAAGGTGAAATTTGGCAAATT
GATAAGTCAGCTCAATCTACAATTAGCCCAAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTTTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
98.413 |
100 |
0.984 |