Detailed information NTG0209543

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AUO97_RS15380
• Genome accession: NZ_CP018664
• Coordinates: 3231876..3232577 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594584.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain ATCC 17978-VU
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3226876..3237577

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AUO97_RS15345 (AUO97_15345)	kdsB	3227399..3228160 (+)	762	WP_000680696.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
AUO97_RS15350 (AUO97_15350)	-	3228172..3229152 (+)	981	WP_001075412.1	DNA polymerase III subunit delta'	-
AUO97_RS15355 (AUO97_15355)	-	3229164..3229505 (+)	342	WP_001183025.1	PilZ domain-containing protein	-
AUO97_RS15360 (AUO97_15360)	-	3229523..3230296 (+)	774	WP_000497298.1	TatD family hydrolase	-
AUO97_RS15365 (AUO97_15365)	-	3230334..3230942 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AUO97_RS15370 (AUO97_15370)	-	3230952..3231506 (+)	555	WP_000841375.1	type II secretion system protein	-
AUO97_RS15375 (AUO97_15375)	xcpV	3231496..3231876 (+)	381	WP_000836915.1	type II secretion system minor pseudopilin GspI	Machinery gene
AUO97_RS15380 (AUO97_15380)	xcpW	3231876..3232577 (+)	702	WP_000594584.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AUO97_RS15385 (AUO97_15385)	gspK	3232577..3233536 (+)	960	WP_000301478.1	type II secretion system minor pseudopilin GspK	-
AUO97_RS15390 (AUO97_15390)	-	3233766..3234362 (+)	597	WP_000908453.1	6-carboxytetrahydropterin synthase	-
AUO97_RS15395 (AUO97_15395)	ung	3234413..3235126 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
AUO97_RS15400 (AUO97_15400)	-	3235123..3236247 (+)	1125	WP_000982062.1	enoyl-CoA hydratase/isomerase family protein	-
AUO97_RS15405 (AUO97_15405)	tadA	3236254..3236757 (+)	504	WP_000033177.1	tRNA adenosine(34) deaminase TadA	-
AUO97_RS15410 (AUO97_15410)	-	3236827..3237270 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26622.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=209543 AUO97_RS15380 WP_000594584.1 3231876..3232577(+) (xcpW) [Acinetobacter baumannii strain ATCC 17978-VU]
MIKNKYIHIRSIASRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLNQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=209543 AUO97_RS15380 WP_000594584.1 3231876..3232577(+) (xcpW) [Acinetobacter baumannii strain ATCC 17978-VU]
ATGATAAAAAATAAATATATTCATATCCGAAGCATTGCTTCTCGTCTTGCGGCGCGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAGTTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAATCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996