Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CRM98_RS08855 | Genome accession | NZ_CP023867 |
| Coordinates | 1683620..1684003 (-) | Length | 127 a.a. |
| NCBI ID | WP_002852281.1 | Uniprot ID | Q9PHN2 |
| Organism | Campylobacter jejuni strain FDAARGOS_422 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 1678620..1689003
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CRM98_RS08830 (CRM98_08830) | aspS | 1679183..1680934 (+) | 1752 | WP_002852289.1 | aspartate--tRNA ligase | - |
| CRM98_RS08835 (CRM98_08835) | adk | 1680931..1681509 (+) | 579 | WP_002852182.1 | adenylate kinase | - |
| CRM98_RS08840 (CRM98_08840) | ppa | 1681519..1682037 (+) | 519 | WP_002852138.1 | inorganic diphosphatase | - |
| CRM98_RS08845 (CRM98_08845) | msrA | 1682079..1682576 (+) | 498 | WP_002852283.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
| CRM98_RS08850 (CRM98_08850) | - | 1682752..1683591 (-) | 840 | WP_002866496.1 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | - |
| CRM98_RS08855 (CRM98_08855) | dprB | 1683620..1684003 (-) | 384 | WP_002852281.1 | Holliday junction resolvase RuvX | Machinery gene |
| CRM98_RS08860 (CRM98_08860) | dprA | 1684000..1684773 (-) | 774 | WP_002852253.1 | DNA-processing protein DprA | Machinery gene |
| CRM98_RS08865 (CRM98_08865) | - | 1684763..1685845 (-) | 1083 | WP_002852295.1 | divergent polysaccharide deacetylase family protein | - |
| CRM98_RS08870 (CRM98_08870) | ilvC | 1685849..1686871 (-) | 1023 | WP_002852218.1 | ketol-acid reductoisomerase | - |
| CRM98_RS08875 (CRM98_08875) | - | 1686990..1688924 (+) | 1935 | WP_002852122.1 | ribonuclease R family protein | - |
Sequence
Protein
Download Length: 127 a.a. Molecular weight: 14088.59 Da Isoelectric Point: 9.5433
>NTDB_id=209380 CRM98_RS08855 WP_002852281.1 1683620..1684003(-) (dprB) [Campylobacter jejuni strain FDAARGOS_422]
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
MRALALDVGLKRIGVALCIDKKIALPLDAVLRKNRNQAANEIKNLLKIHEISLLIVGIPKGGSSEEEMTRRIKHFVSLLE
FDKEICFVDESGTSKEALGYGVANTRKKDGKLDSLSAFIMIKDYFAL
Nucleotide
Download Length: 384 bp
>NTDB_id=209380 CRM98_RS08855 WP_002852281.1 1683620..1684003(-) (dprB) [Campylobacter jejuni strain FDAARGOS_422]
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
ATGAGAGCTTTGGCTTTAGATGTAGGTTTAAAACGCATAGGTGTAGCGCTTTGCATAGATAAAAAGATCGCTTTGCCTTT
AGATGCAGTTTTAAGAAAAAATCGCAATCAAGCCGCTAATGAAATCAAAAATTTACTTAAAATACATGAGATTTCTTTAC
TCATTGTAGGCATTCCTAAGGGTGGATCAAGTGAAGAAGAAATGACAAGACGCATTAAGCATTTTGTTTCTTTGCTTGAA
TTTGATAAAGAAATTTGCTTTGTAGATGAAAGCGGAACAAGCAAAGAAGCTTTAGGATACGGCGTAGCCAATACACGCAA
AAAAGATGGTAAATTAGACTCCTTATCCGCTTTTATCATGATAAAGGATTATTTTGCTCTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
44.882 |
100 |
0.449 |