Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | BS467_RS12560 | Genome accession | NZ_CP018574 |
| Coordinates | 2411505..2412575 (+) | Length | 356 a.a. |
| NCBI ID | WP_017357987.1 | Uniprot ID | - |
| Organism | Bacillus altitudinis strain GLB197 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2406505..2417575
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS467_RS12525 (BS467_12530) | - | 2407749..2408063 (+) | 315 | WP_008342314.1 | MTH1187 family thiamine-binding protein | - |
| BS467_RS12530 (BS467_12535) | - | 2408088..2408261 (-) | 174 | WP_003217333.1 | DUF2759 domain-containing protein | - |
| BS467_RS12535 (BS467_12540) | - | 2408422..2409060 (+) | 639 | WP_017357989.1 | MBL fold metallo-hydrolase | - |
| BS467_RS12540 (BS467_12545) | - | 2409109..2409351 (-) | 243 | WP_003217440.1 | DUF2626 domain-containing protein | - |
| BS467_RS12545 (BS467_12550) | - | 2409564..2409944 (+) | 381 | WP_007501232.1 | Spx/MgsR family RNA polymerase-binding regulatory protein | - |
| BS467_RS12555 (BS467_12560) | - | 2410170..2411039 (+) | 870 | WP_007501231.1 | STAS domain-containing protein | - |
| BS467_RS12560 (BS467_12565) | comGA | 2411505..2412575 (+) | 1071 | WP_017357987.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| BS467_RS12565 (BS467_12570) | comGB | 2412556..2413596 (+) | 1041 | WP_017357986.1 | competence type IV pilus assembly protein ComGB | - |
| BS467_RS12570 (BS467_12575) | comGC | 2413613..2413906 (+) | 294 | WP_008342186.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| BS467_RS12575 (BS467_12580) | comGD | 2413899..2414345 (+) | 447 | WP_017357985.1 | competence type IV pilus minor pilin ComGD | - |
| BS467_RS12580 (BS467_12585) | comGE | 2414329..2414643 (+) | 315 | WP_017357984.1 | competence type IV pilus minor pilin ComGE | - |
| BS467_RS12585 (BS467_12590) | comGF | 2414585..2415082 (+) | 498 | WP_041091745.1 | competence type IV pilus minor pilin ComGF | - |
| BS467_RS12590 (BS467_12595) | - | 2415079..2415462 (+) | 384 | WP_041091746.1 | competence type IV pilus minor pilin ComGG | - |
| BS467_RS12595 (BS467_12600) | - | 2415523..2415717 (+) | 195 | WP_008342191.1 | YqzE family protein | - |
| BS467_RS12600 (BS467_12605) | - | 2415752..2416078 (-) | 327 | WP_007501224.1 | DUF3889 domain-containing protein | - |
| BS467_RS12605 (BS467_12610) | tapA | 2416331..2416858 (+) | 528 | WP_041091748.1 | amyloid fiber anchoring/assembly protein TapA | - |
| BS467_RS12610 (BS467_12615) | sipW | 2416908..2417480 (+) | 573 | WP_041091749.1 | signal peptidase I SipW | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40339.70 Da Isoelectric Point: 9.0449
>NTDB_id=208992 BS467_RS12560 WP_017357987.1 2411505..2412575(+) (comGA) [Bacillus altitudinis strain GLB197]
MYGIEYLGQELLEEACRMRASDVHIVPREKEASVSFRVDADLIQQRIIDKKSGERLIAHFKFLSSMDIGERRRPQNGSLA
VMLRRGQVFVRLSTLPTVNDESLVIRILPQDHVPKTKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELACPFCGETCELYCKLNRPVRRTNVFELLYGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKSTYHRWVYEEASL
MYGIEYLGQELLEEACRMRASDVHIVPREKEASVSFRVDADLIQQRIIDKKSGERLIAHFKFLSSMDIGERRRPQNGSLA
VMLRRGQVFVRLSTLPTVNDESLVIRILPQDHVPKTKYLSLFPKASARLLSFLNHSHGLILFTGPTNSGKTTTLYSLIQF
AKKHFNRNIITLEDPVETRNEEVLQVQVNEKAGITYAAGLRAILRHDPDMIVLGEIRDAETARTAIRAALTGHLVMSTLH
AKNAKGALYRMLEFGVTMNELEQTMVAIAAQRLIELACPFCGETCELYCKLNRPVRRTNVFELLYGKELGECIKEAKGEY
AHSSYETLQRLIRKGVALGYLSKSTYHRWVYEEASL
Nucleotide
Download Length: 1071 bp
>NTDB_id=208992 BS467_RS12560 WP_017357987.1 2411505..2412575(+) (comGA) [Bacillus altitudinis strain GLB197]
TTGTATGGTATTGAATATTTGGGGCAAGAGCTGCTAGAAGAGGCGTGCCGCATGAGAGCATCTGATGTGCATATTGTTCC
GAGAGAAAAGGAAGCTTCAGTCTCTTTTCGTGTAGACGCTGACCTCATTCAGCAGCGGATCATTGACAAAAAGAGCGGAG
AGCGGCTCATTGCTCATTTCAAATTTTTATCTTCTATGGATATTGGTGAAAGAAGGAGACCACAAAATGGATCATTGGCT
GTGATGTTAAGACGCGGTCAAGTGTTTGTTCGGCTTTCTACATTACCGACTGTAAATGATGAAAGTTTAGTGATTCGGAT
TTTACCGCAGGATCATGTGCCGAAAACAAAGTATTTGTCACTGTTCCCGAAGGCTTCAGCGAGATTATTATCGTTTCTGA
ATCATTCGCATGGGCTCATTTTATTTACTGGACCAACAAATTCAGGGAAAACGACAACACTTTATTCATTGATCCAGTTT
GCCAAAAAACATTTTAATCGAAATATTATTACCCTTGAAGATCCTGTGGAAACAAGAAATGAAGAAGTGCTGCAGGTTCA
AGTAAATGAAAAAGCTGGTATCACGTATGCGGCAGGTTTACGCGCTATTTTAAGACATGATCCAGATATGATTGTGCTTG
GAGAAATAAGAGATGCGGAAACAGCGAGAACAGCTATTAGAGCAGCTTTGACAGGTCATTTAGTCATGAGCACACTGCAC
GCAAAGAATGCAAAAGGAGCTCTTTATCGAATGCTCGAATTTGGTGTGACGATGAATGAACTCGAACAAACAATGGTTGC
CATTGCTGCTCAGCGGTTAATCGAACTCGCATGTCCATTTTGCGGCGAAACGTGTGAGCTTTATTGCAAACTAAATCGGC
CAGTCAGACGAACAAATGTATTTGAATTGCTTTACGGAAAGGAGCTTGGTGAGTGTATCAAAGAGGCAAAAGGTGAATAC
GCTCATTCGTCATACGAAACACTGCAAAGATTAATTCGGAAAGGAGTGGCACTCGGCTATTTATCAAAAAGCACATATCA
TCGATGGGTTTATGAAGAAGCGAGCCTCTAA
TTGTATGGTATTGAATATTTGGGGCAAGAGCTGCTAGAAGAGGCGTGCCGCATGAGAGCATCTGATGTGCATATTGTTCC
GAGAGAAAAGGAAGCTTCAGTCTCTTTTCGTGTAGACGCTGACCTCATTCAGCAGCGGATCATTGACAAAAAGAGCGGAG
AGCGGCTCATTGCTCATTTCAAATTTTTATCTTCTATGGATATTGGTGAAAGAAGGAGACCACAAAATGGATCATTGGCT
GTGATGTTAAGACGCGGTCAAGTGTTTGTTCGGCTTTCTACATTACCGACTGTAAATGATGAAAGTTTAGTGATTCGGAT
TTTACCGCAGGATCATGTGCCGAAAACAAAGTATTTGTCACTGTTCCCGAAGGCTTCAGCGAGATTATTATCGTTTCTGA
ATCATTCGCATGGGCTCATTTTATTTACTGGACCAACAAATTCAGGGAAAACGACAACACTTTATTCATTGATCCAGTTT
GCCAAAAAACATTTTAATCGAAATATTATTACCCTTGAAGATCCTGTGGAAACAAGAAATGAAGAAGTGCTGCAGGTTCA
AGTAAATGAAAAAGCTGGTATCACGTATGCGGCAGGTTTACGCGCTATTTTAAGACATGATCCAGATATGATTGTGCTTG
GAGAAATAAGAGATGCGGAAACAGCGAGAACAGCTATTAGAGCAGCTTTGACAGGTCATTTAGTCATGAGCACACTGCAC
GCAAAGAATGCAAAAGGAGCTCTTTATCGAATGCTCGAATTTGGTGTGACGATGAATGAACTCGAACAAACAATGGTTGC
CATTGCTGCTCAGCGGTTAATCGAACTCGCATGTCCATTTTGCGGCGAAACGTGTGAGCTTTATTGCAAACTAAATCGGC
CAGTCAGACGAACAAATGTATTTGAATTGCTTTACGGAAAGGAGCTTGGTGAGTGTATCAAAGAGGCAAAAGGTGAATAC
GCTCATTCGTCATACGAAACACTGCAAAGATTAATTCGGAAAGGAGTGGCACTCGGCTATTTATCAAAAAGCACATATCA
TCGATGGGTTTATGAAGAAGCGAGCCTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
65.254 |
99.438 |
0.649 |