Detailed information    

insolico Bioinformatically predicted

Overview


Name   degQ   Type   Regulator
Locus tag   BS467_RS09215 Genome accession   NZ_CP018574
Coordinates   1800538..1800678 (+) Length   46 a.a.
NCBI ID   WP_003213123.1    Uniprot ID   A0A5K1N966
Organism   Bacillus altitudinis strain GLB197     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1795538..1805678
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS467_RS09190 (BS467_09195) - 1795769..1796176 (+) 408 WP_007500468.1 YueI family protein -
  BS467_RS09195 (BS467_09200) - 1796237..1796788 (+) 552 WP_008345872.1 cysteine hydrolase family protein -
  BS467_RS09200 (BS467_09205) - 1796806..1798275 (+) 1470 WP_017358937.1 nicotinate phosphoribosyltransferase -
  BS467_RS09205 (BS467_09210) - 1798416..1799642 (+) 1227 WP_035701209.1 EAL and HDOD domain-containing protein -
  BS467_RS09210 (BS467_09215) - 1799679..1800032 (-) 354 WP_019744042.1 hypothetical protein -
  BS467_RS09215 (BS467_09220) degQ 1800538..1800678 (+) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  BS467_RS09220 (BS467_09225) - 1800830..1801744 (+) 915 WP_060832601.1 polyprenyl synthetase family protein -
  BS467_RS09225 (BS467_09230) comX 1801741..1801911 (+) 171 WP_074041927.1 competence pheromone ComX -
  BS467_RS09230 (BS467_09235) comP 1801952..1804264 (+) 2313 WP_035701206.1 ATP-binding protein Regulator
  BS467_RS09235 (BS467_09240) comA 1804345..1804986 (+) 642 WP_007500477.1 response regulator transcription factor Regulator
  BS467_RS09240 (BS467_09245) - 1805010..1805399 (+) 390 WP_017358943.1 hotdog fold thioesterase -

Sequence


Protein


Download         Length: 46 a.a.        Molecular weight: 5677.42 Da        Isoelectric Point: 4.6828

>NTDB_id=208980 BS467_RS09215 WP_003213123.1 1800538..1800678(+) (degQ) [Bacillus altitudinis strain GLB197]
MEKYEIEELKQLLWKLENEIRETTASLHNINKSIDQYDKYEYVKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=208980 BS467_RS09215 WP_003213123.1 1800538..1800678(+) (degQ) [Bacillus altitudinis strain GLB197]
ATGGAAAAGTATGAAATCGAAGAACTTAAACAATTATTATGGAAACTTGAAAACGAAATTAGAGAAACAACGGCTTCTCT
TCATAACATTAACAAAAGCATTGATCAATACGACAAATATGAATATGTGAAAATTTCTTAA

Domains


Predicted by InterproScan.

(1-46)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A5K1N966

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

68.085

100

0.696


Multiple sequence alignment