Detailed information
Bioinformatically predicted
Overview
| Name | comL | Type | Machinery gene |
| Locus tag | b2595 | Genome accession | NC_000913 |
| Coordinates | 2736146..2736883 (+) | Length | 245 a.a. |
| NCBI ID | NP_417086.1 | Uniprot ID | P0AC02 |
| Organism | Escherichia coli str. K-12 substr. MG1655 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2731146..2741883
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| b2592 | clpB | 2731600..2733729 (-) | 2130 | YP_010051194.1 | ClpB80 | - |
| b2593 | yfiH | 2734303..2735034 (-) | 732 | NP_417084.1 | purine nucleoside phosphorylase YfiH | - |
| b2594 | rluD | 2735031..2736011 (-) | 981 | NP_417085.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase | - |
| b2595 | comL | 2736146..2736883 (+) | 738 | NP_417086.1 | outer membrane protein assembly factor BamD | Machinery gene |
| b2597 | raiA | 2737154..2737495 (+) | 342 | NP_417088.1 | ribosome-associated inhibitor A | - |
| b2598 | pheL | 2737599..2737646 (+) | 48 | NP_417089.1 | phe operon leader peptide | - |
| b2599 | pheA | 2737745..2738905 (+) | 1161 | NP_417090.1 | fused chorismate mutase/prephenate dehydratase | - |
| b2600 | tyrA | 2738948..2740069 (-) | 1122 | NP_417091.1 | fused chorismate mutase/prephenate dehydrogenase | - |
| b2601 | aroF | 2740080..2741150 (-) | 1071 | NP_417092.1 | 3-deoxy-7-phosphoheptulonate synthase, Tyr-sensitive | - |
| b2602 | yfiL | 2741360..2741725 (+) | 366 | NP_417093.2 | DUF2799 domain-containing lipoprotein YfiL | - |
Sequence
Protein
Download Length: 245 a.a. Molecular weight: 27829.40 Da Isoelectric Point: 6.4874
>NTDB_id=20864 b2595 NP_417086.1 2736146..2736883(+) (comL) [Escherichia coli str. K-12 substr. MG1655]
MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY
KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA
NSSNT
MTRMKYLVAAATLSLFLAGCSGSKEEVPDNPPNEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYY
KNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQHARAAFSDFSKLVRGYPNSQYT
TDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDYPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAA
NSSNT
Nucleotide
Download Length: 738 bp
>NTDB_id=20864 b2595 NP_417086.1 2736146..2736883(+) (comL) [Escherichia coli str. K-12 substr. MG1655]
ATGACGCGCATGAAATATCTGGTGGCAGCCGCCACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGT
ACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGC
AACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTAT
AAAAACGCCGATTTGCCGTTAGCACAGGCTGCCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTA
TGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGATCGTAGCG
ATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTCAGTACACC
ACCGATGCCACCAAACGTCTGGTATTCCTGAAAGATCGTCTGGCGAAATATGAATACTCCGTGGCCGAGTACTATACAGA
ACGTGGCGCATGGGTTGCCGTCGTTAACCGCGTAGAAGGCATGTTGCGCGACTACCCGGATACCCAGGCTACGCGTGATG
CGCTGCCGCTGATGGAAAATGCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCA
AACAGCAGCAATACATAA
ATGACGCGCATGAAATATCTGGTGGCAGCCGCCACACTAAGCCTGTTTTTGGCGGGTTGCTCGGGGTCAAAGGAAGAAGT
ACCTGATAATCCGCCAAATGAAATTTACGCGACTGCACAACAAAAGCTGCAGGACGGTAACTGGAGACAGGCAATAACGC
AACTGGAAGCGTTAGATAATCGCTATCCGTTTGGTCCGTATTCGCAGCAGGTGCAGCTGGATCTCATCTACGCCTACTAT
AAAAACGCCGATTTGCCGTTAGCACAGGCTGCCATCGATCGTTTTATTCGCCTTAACCCGACCCATCCGAATATCGATTA
TGTCATGTACATGCGTGGCCTGACCAATATGGCGCTGGATGACAGTGCGCTGCAAGGGTTCTTTGGCGTCGATCGTAGCG
ATCGCGATCCTCAACATGCACGAGCTGCGTTTAGTGACTTTTCCAAACTGGTGCGCGGCTATCCGAACAGTCAGTACACC
ACCGATGCCACCAAACGTCTGGTATTCCTGAAAGATCGTCTGGCGAAATATGAATACTCCGTGGCCGAGTACTATACAGA
ACGTGGCGCATGGGTTGCCGTCGTTAACCGCGTAGAAGGCATGTTGCGCGACTACCCGGATACCCAGGCTACGCGTGATG
CGCTGCCGCTGATGGAAAATGCATACCGTCAGATGCAGATGAATGCGCAAGCTGAAAAAGTAGCGAAAATCATCGCCGCA
AACAGCAGCAATACATAA
3D structure
| Source | ID | Structure |
|---|---|---|
| PDB | 2YHC | |
| PDB | 3Q5M | |
| PDB | 3TGO | |
| PDB | 5AYW | |
| PDB | 5D0O | |
| PDB | 5D0Q | |
| PDB | 5EKQ | |
| PDB | 5LJO | |
| PDB | 6LYQ | |
| PDB | 6LYR | |
| PDB | 6LYS | |
| PDB | 6LYU | |
| PDB | 6SMX | |
| PDB | 6SN0 | |
| PDB | 6SN2 | |
| PDB | 6SN3 | |
| PDB | 6SN4 | |
| PDB | 6SN5 | |
| PDB | 6SN7 | |
| PDB | 6SN8 | |
| PDB | 6SN9 | |
| PDB | 6SO7 | |
| PDB | 6SO8 | |
| PDB | 6SOA | |
| PDB | 6SOB | |
| PDB | 6SOC | |
| PDB | 6SOG | |
| PDB | 6SOH | |
| PDB | 6SOJ | |
| PDB | 6V05 | |
| PDB | 7BNQ | |
| PDB | 7NBX | |
| PDB | 7NCS | |
| PDB | 7ND0 | |
| PDB | 7NRI | |
| PDB | 7R1W | |
| PDB | 7RI4 | |
| PDB | 7RI5 | |
| PDB | 7RI6 | |
| PDB | 7RI7 | |
| PDB | 7RI9 | |
| PDB | 7RJ5 | |
| PDB | 7TSZ | |
| PDB | 7TT0 | |
| PDB | 7TT1 | |
| PDB | 7TT2 | |
| PDB | 7TT3 | |
| PDB | 7TT4 | |
| PDB | 7TT5 | |
| PDB | 7TT6 | |
| PDB | 7TT7 | |
| PDB | 7TTC | |
| PDB | 7YE4 | |
| PDB | 7YE6 | |
| PDB | 8ADG | |
| PDB | 8ADI | |
| PDB | 8BNZ | |
| PDB | 8BO2 | |
| PDB | 8BVQ | |
| PDB | 8BWC | |
| PDB | 8PZ1 | |
| PDB | 8PZ2 | |
| PDB | 8PZU | |
| PDB | 8PZV | |
| PDB | 8Q0G | |
| PDB | 8QN4 | |
| PDB | 8QP5 | |
| PDB | 8QPU | |
| PDB | 8QPV | |
| PDB | 8QPW | |
| PDB | 8SPR | |
| PDB | 8SQA | |
| PDB | 8SQB | |
| PDB | 9CNW | |
| PDB | 9CNX | |
| PDB | 9CNY | |
| PDB | 9CNZ | |
| PDB | 9CO0 | |
| PDB | 9H84 | |
| PDB | 9H85 | |
| PDB | 9H89 | |
| PDB | 9HE1 | |
| PDB | 9HG5 | |
| PDB | 9HG6 | |
| PDB | 9HG7 | |
| PDB | 9HG8 | |
| PDB | 9HG9 | |
| PDB | 9HGA | |
| PDB | 9MGE | |
| PDB | 9MGF | |
| PDB | 9MGG |
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comL | Neisseria meningitidis MC58 |
38.525 |
99.592 |
0.384 |
| comL | Neisseria gonorrhoeae MS11 |
37.705 |
99.592 |
0.376 |