Detailed information NTG0020864

Bioinformatically predicted

Overview

• Name: amiD
• Type: Regulator
• Locus tag: SPY_RS01370
• Genome accession: NC_002737
• Coordinates: 260442..261368 (+)
• Length: 308 a.a.
• NCBI ID: WP_010921892.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes M1 GAS
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 255442..266368

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPY_RS01360	amiA	256905..258875 (+)	1971	WP_011285389.1	peptide ABC transporter substrate-binding protein	Regulator
SPY_RS01365 (SPy0294)	amiC	258940..260442 (+)	1503	WP_010921891.1	ABC transporter permease	Regulator
SPY_RS01370 (SPy0295)	amiD	260442..261368 (+)	927	WP_010921892.1	oligopeptide ABC transporter permease OppC	Regulator
SPY_RS01375 (SPy0296)	amiE	261377..262447 (+)	1071	WP_010921893.1	ABC transporter ATP-binding protein	Regulator
SPY_RS01380 (SPy0297)	amiF	262440..263363 (+)	924	WP_002986000.1	ATP-binding cassette domain-containing protein	Regulator

Sequence

Protein

• Length: 308 a.a.
• Molecular weight: 34896.82 Da
• Isoelectric Point: 8.5670

>NTDB_id=20864 SPY_RS01370 WP_010921892.1 260442..261368(+) (amiD) [Streptococcus pyogenes M1 GAS]
MESIDKSKFRFVERDSEASEVIDTPAYSYWKSVFRQFFSKKSTVFMLVILVTVLMMSFIYPMFANYDFNDVSNINDFSKR
YIWPNAEYWFGTDKNGQSLFDGVWYGARNSILISVIATLINITIGVVLGAIWGVSKAFDKVMIEIYNIISNIPSMLIIIV
LTYSLGAGFWNLILAFCITGWIGVAYSIRVQILRYRDLEYNLASQTLGTPMYKIAVKNLLPQLVSVIMTMLSQMLPVYVS
SEAFLSFFGIGLPTTTPSLGRFIANYSSNLTTNAYLFWIPLVTLILVSLPLYIVGQNLADASDPRSHR

Nucleotide

• Length: 927 bp

>NTDB_id=20864 SPY_RS01370 WP_010921892.1 260442..261368(+) (amiD) [Streptococcus pyogenes M1 GAS]
ATGGAATCGATTGATAAATCTAAATTTCGATTTGTTGAGCGCGATAGTGAAGCCTCCGAAGTGATTGATACCCCTGCTTA
TTCTTACTGGAAATCAGTGTTTCGTCAGTTTTTTTCTAAAAAATCTACAGTCTTTATGCTCGTAATTTTAGTGACAGTCT
TGATGATGAGCTTTATTTATCCAATGTTTGCCAACTACGACTTTAATGACGTTAGTAATATCAATGACTTTTCAAAGCGT
TATATTTGGCCAAATGCAGAGTACTGGTTTGGAACCGACAAAAATGGGCAATCTCTGTTTGATGGTGTTTGGTATGGGGC
ACGTAATTCTATTTTAATCTCAGTTATAGCGACACTAATTAATATCACCATTGGGGTAGTGTTAGGAGCCATATGGGGAG
TTTCTAAAGCATTTGATAAAGTTATGATTGAAATTTATAACATTATCTCAAATATCCCTTCTATGCTTATTATCATTGTT
TTGACCTATTCATTAGGTGCAGGATTTTGGAATTTGATTCTAGCTTTCTGTATCACTGGATGGATTGGTGTCGCCTACTC
CATCCGTGTTCAAATCTTGCGTTACCGTGATTTAGAATACAACCTTGCTAGTCAAACTTTGGGAACACCAATGTACAAGA
TTGCTGTTAAGAACCTCCTGCCTCAATTGGTTTCAGTTATCATGACTATGTTGTCACAAATGCTACCAGTTTATGTATCT
TCTGAGGCCTTCTTATCCTTCTTTGGGATTGGTTTACCAACCACCACTCCAAGTTTAGGACGTTTTATTGCTAATTATTC
AAGCAACTTAACAACAAATGCCTACCTCTTTTGGATTCCCTTAGTAACATTGATTTTAGTATCGTTACCACTATACATTG
TCGGACAAAACTTGGCTGATGCCAGTGACCCACGTTCACATAGATAG

Domains

Predicted by InterproScan.

• N-terminal TM domain of oligopeptide transport permease C (OppC_N) (28-72)

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (125-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiD	Streptococcus salivarius strain HSISS4	73.377	100	0.734
amiD	Streptococcus thermophilus LMG 18311	72.727	100	0.727
amiD	Streptococcus thermophilus LMD-9	72.727	100	0.727