Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   BS103_RS00765 Genome accession   NZ_CP018332
Coordinates   155580..156734 (-) Length   384 a.a.
NCBI ID   WP_032051422.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain A1296     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 150580..161734
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS103_RS00745 (BS103_00735) - 151741..152391 (+) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  BS103_RS00750 (BS103_00740) - 152497..153417 (+) 921 WP_000084546.1 DMT family transporter -
  BS103_RS00755 (BS103_00745) - 153809..154378 (-) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  BS103_RS00760 (BS103_00750) dprA 154429..155559 (-) 1131 WP_097355435.1 DNA-processing protein DprA Machinery gene
  BS103_RS00765 (BS103_00755) tsaP 155580..156734 (-) 1155 WP_032051422.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  BS103_RS00770 (BS103_00760) def 156857..157387 (+) 531 WP_001196539.1 peptide deformylase -
  BS103_RS00775 (BS103_00765) - 157424..157852 (+) 429 WP_000231981.1 DUF2946 family protein -
  BS103_RS00780 (BS103_00770) - 157924..160038 (+) 2115 WP_001120664.1 TonB-dependent copper receptor -
  BS103_RS00785 (BS103_00775) - 160092..160298 (+) 207 WP_000182542.1 hypothetical protein -
  BS103_RS00790 (BS103_00780) - 160368..161582 (-) 1215 WP_032051420.1 oxygenase MpaB family protein -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42327.24 Da        Isoelectric Point: 8.5790

>NTDB_id=208094 BS103_RS00765 WP_032051422.1 155580..156734(-) (tsaP) [Acinetobacter baumannii strain A1296]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVQATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
NSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMPEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGVQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=208094 BS103_RS00765 WP_032051422.1 155580..156734(-) (tsaP) [Acinetobacter baumannii strain A1296]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCAGGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGGGACGGCTGTGTCGGTATTATCCGTCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AACAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAAGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGCGATCGTGTTATGCCTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGTTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGACCGCGGTACAACCCAGGGCGTTCAAGTAGGCCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACCAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAGGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.958

100

0.99


Multiple sequence alignment