Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | BSZ04_RS11040 | Genome accession | NZ_CP018312 |
| Coordinates | 409440..410054 (-) | Length | 204 a.a. |
| NCBI ID | WP_010450170.1 | Uniprot ID | A0A2K7SNB8 |
| Organism | Vibrio rotiferianus strain B64D1 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 404440..415054
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSZ04_RS11030 (BSZ04_10925) | aceF | 405551..407473 (+) | 1923 | WP_088880394.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
| BSZ04_RS11035 (BSZ04_10930) | lpdA | 407717..409147 (+) | 1431 | WP_005438019.1 | dihydrolipoyl dehydrogenase | - |
| BSZ04_RS11040 (BSZ04_10935) | opaR | 409440..410054 (-) | 615 | WP_010450170.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| BSZ04_RS11045 (BSZ04_10940) | hpt | 410374..410904 (+) | 531 | WP_010450168.1 | hypoxanthine phosphoribosyltransferase | - |
| BSZ04_RS11050 (BSZ04_10945) | can | 410993..411661 (-) | 669 | WP_010450166.1 | carbonate dehydratase | - |
| BSZ04_RS11055 (BSZ04_10950) | - | 411946..413616 (+) | 1671 | WP_088880395.1 | SulP family inorganic anion transporter | - |
| BSZ04_RS11060 (BSZ04_10955) | - | 413857..414774 (+) | 918 | WP_088880396.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 204 a.a. Molecular weight: 23561.80 Da Isoelectric Point: 6.0765
>NTDB_id=207994 BSZ04_RS11040 WP_010450170.1 409440..410054(-) (opaR) [Vibrio rotiferianus strain B64D1]
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCSEHEPE
HLANLFHGICYSLFVQANRSKSESELASLVNSYLDMLCIYNRDH
MDSIAKRPRTRLSPLKRKQQLMEIALEVFARRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVRQFSNFLS
DNIDLDIHARENIANITNAMIELVSQDCHWLKVWFEWSASTRDEVWPLFVTTNRTNQLLVQNMFIKAIERGEVCSEHEPE
HLANLFHGICYSLFVQANRSKSESELASLVNSYLDMLCIYNRDH
Nucleotide
Download Length: 615 bp
>NTDB_id=207994 BSZ04_RS11040 WP_010450170.1 409440..410054(-) (opaR) [Vibrio rotiferianus strain B64D1]
ATGGACTCAATTGCAAAGAGGCCTCGTACTAGGCTTTCGCCTCTTAAACGTAAACAACAACTGATGGAAATCGCTCTAGA
AGTATTTGCTCGTCGCGGCATTGGCCGTGGTGGTCATGCGGATATTGCCGAGATCGCTCAAGTTTCTGTTGCGACTGTAT
TTAACTACTTCCCGACTCGCGAAGATTTGGTGGATGAAGTTCTGAACCACGTTGTTCGTCAGTTCTCTAACTTTTTGTCT
GATAATATTGACTTAGACATTCATGCTCGTGAGAACATCGCCAACATCACTAATGCAATGATTGAGCTAGTAAGCCAAGA
TTGCCACTGGCTGAAAGTATGGTTTGAGTGGAGTGCTTCAACACGTGATGAAGTATGGCCACTTTTTGTAACTACAAACC
GTACCAACCAACTGCTAGTGCAAAACATGTTCATTAAGGCAATCGAACGTGGTGAAGTATGTTCTGAGCATGAACCAGAG
CACTTGGCAAACCTCTTCCATGGCATCTGTTACTCTTTATTTGTGCAAGCAAATCGTTCTAAGAGTGAATCTGAACTAGC
TAGCTTAGTTAATTCTTACCTAGATATGCTTTGCATCTACAACCGCGACCATTAA
ATGGACTCAATTGCAAAGAGGCCTCGTACTAGGCTTTCGCCTCTTAAACGTAAACAACAACTGATGGAAATCGCTCTAGA
AGTATTTGCTCGTCGCGGCATTGGCCGTGGTGGTCATGCGGATATTGCCGAGATCGCTCAAGTTTCTGTTGCGACTGTAT
TTAACTACTTCCCGACTCGCGAAGATTTGGTGGATGAAGTTCTGAACCACGTTGTTCGTCAGTTCTCTAACTTTTTGTCT
GATAATATTGACTTAGACATTCATGCTCGTGAGAACATCGCCAACATCACTAATGCAATGATTGAGCTAGTAAGCCAAGA
TTGCCACTGGCTGAAAGTATGGTTTGAGTGGAGTGCTTCAACACGTGATGAAGTATGGCCACTTTTTGTAACTACAAACC
GTACCAACCAACTGCTAGTGCAAAACATGTTCATTAAGGCAATCGAACGTGGTGAAGTATGTTCTGAGCATGAACCAGAG
CACTTGGCAAACCTCTTCCATGGCATCTGTTACTCTTTATTTGTGCAAGCAAATCGTTCTAAGAGTGAATCTGAACTAGC
TAGCTTAGTTAATTCTTACCTAGATATGCTTTGCATCTACAACCGCGACCATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
93.627 |
100 |
0.936 |
| hapR | Vibrio cholerae C6706 |
71.717 |
97.059 |
0.696 |
| hapR | Vibrio cholerae strain A1552 |
71.717 |
97.059 |
0.696 |