Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | BSZ05_RS04130 | Genome accession | NZ_CP018308 |
| Coordinates | 916555..917175 (+) | Length | 206 a.a. |
| NCBI ID | WP_006074436.1 | Uniprot ID | A0A084TG98 |
| Organism | Vibrio mediterranei strain QT6D1 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 911555..922175
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BSZ05_RS04110 (BSZ05_04100) | - | 911809..912729 (-) | 921 | WP_038223002.1 | ABC transporter ATP-binding protein | - |
| BSZ05_RS04115 (BSZ05_04105) | - | 912894..914540 (-) | 1647 | WP_088876255.1 | SulP family inorganic anion transporter | - |
| BSZ05_RS04120 (BSZ05_04110) | can | 914773..915432 (+) | 660 | WP_006074438.1 | carbonate dehydratase | - |
| BSZ05_RS04125 (BSZ05_04115) | hpt | 915497..916027 (-) | 531 | WP_006074437.1 | hypoxanthine phosphoribosyltransferase | - |
| BSZ05_RS04130 (BSZ05_04120) | opaR | 916555..917175 (+) | 621 | WP_006074436.1 | LuxR/HapR/OpaR family quorum-sensing transcriptional regulator | Regulator |
| BSZ05_RS04135 (BSZ05_04125) | lpdA | 917276..918703 (-) | 1428 | WP_006074435.1 | dihydrolipoyl dehydrogenase | - |
| BSZ05_RS04140 (BSZ05_04130) | aceF | 918977..920878 (-) | 1902 | WP_088876256.1 | pyruvate dehydrogenase complex dihydrolipoyllysine-residue acetyltransferase | - |
Sequence
Protein
Download Length: 206 a.a. Molecular weight: 23639.89 Da Isoelectric Point: 5.3141
>NTDB_id=207936 BSZ05_RS04130 WP_006074436.1 916555..917175(+) (opaR) [Vibrio mediterranei strain QT6D1]
MDSIVKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVCQYSNFLS
NTIDLDVDIKENLTNILDGVVDMVIEDCHWNKVWFEWSTSTRDEVWPLFVSSNKTSQALIENMFIKAIERGEVCSQHNTK
HLTSLFHGICYSLFVEANRSSDGESIKSLTDCYMDMVCIYEKDSRH
MDSIVKRPRTRLSPQKRKLQLMEIALEVFAKRGIGRGGHADIAEIAQVSVATVFNYFPTREDLVDEVLNHVVCQYSNFLS
NTIDLDVDIKENLTNILDGVVDMVIEDCHWNKVWFEWSTSTRDEVWPLFVSSNKTSQALIENMFIKAIERGEVCSQHNTK
HLTSLFHGICYSLFVEANRSSDGESIKSLTDCYMDMVCIYEKDSRH
Nucleotide
Download Length: 621 bp
>NTDB_id=207936 BSZ05_RS04130 WP_006074436.1 916555..917175(+) (opaR) [Vibrio mediterranei strain QT6D1]
ATGGACTCAATAGTAAAAAGACCTAGAACTCGCTTATCTCCACAAAAGCGCAAGTTACAGCTTATGGAGATTGCACTAGA
AGTATTCGCGAAACGCGGCATTGGTCGTGGAGGTCACGCGGATATCGCAGAAATTGCTCAAGTTTCAGTAGCAACGGTAT
TCAACTACTTCCCAACACGAGAAGACTTGGTTGATGAAGTACTTAACCACGTCGTCTGTCAGTATTCCAACTTCTTATCA
AATACCATTGACCTTGATGTCGATATCAAAGAAAACCTAACCAACATTCTTGATGGTGTGGTGGATATGGTGATCGAAGA
CTGTCACTGGAATAAGGTATGGTTTGAATGGAGTACATCTACGCGTGATGAGGTTTGGCCATTGTTTGTTTCATCGAACA
AAACTAGCCAAGCACTGATTGAGAACATGTTCATTAAAGCCATTGAACGTGGCGAAGTCTGCTCTCAACACAACACCAAG
CATCTTACTAGCCTATTCCACGGTATTTGCTATTCACTGTTTGTTGAAGCTAATCGCAGTAGTGATGGTGAATCCATTAA
GTCGTTGACCGACTGCTATATGGATATGGTTTGCATCTACGAGAAAGATAGCCGCCACTAA
ATGGACTCAATAGTAAAAAGACCTAGAACTCGCTTATCTCCACAAAAGCGCAAGTTACAGCTTATGGAGATTGCACTAGA
AGTATTCGCGAAACGCGGCATTGGTCGTGGAGGTCACGCGGATATCGCAGAAATTGCTCAAGTTTCAGTAGCAACGGTAT
TCAACTACTTCCCAACACGAGAAGACTTGGTTGATGAAGTACTTAACCACGTCGTCTGTCAGTATTCCAACTTCTTATCA
AATACCATTGACCTTGATGTCGATATCAAAGAAAACCTAACCAACATTCTTGATGGTGTGGTGGATATGGTGATCGAAGA
CTGTCACTGGAATAAGGTATGGTTTGAATGGAGTACATCTACGCGTGATGAGGTTTGGCCATTGTTTGTTTCATCGAACA
AAACTAGCCAAGCACTGATTGAGAACATGTTCATTAAAGCCATTGAACGTGGCGAAGTCTGCTCTCAACACAACACCAAG
CATCTTACTAGCCTATTCCACGGTATTTGCTATTCACTGTTTGTTGAAGCTAATCGCAGTAGTGATGGTGAATCCATTAA
GTCGTTGACCGACTGCTATATGGATATGGTTTGCATCTACGAGAAAGATAGCCGCCACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
73.399 |
98.544 |
0.723 |
| hapR | Vibrio cholerae C6706 |
70.352 |
96.602 |
0.68 |
| hapR | Vibrio cholerae strain A1552 |
70.352 |
96.602 |
0.68 |