Detailed information
Bioinformatically predicted
Overview
| Name | opaR | Type | Regulator |
| Locus tag | BST98_RS02065 | Genome accession | NZ_CP018297 |
| Coordinates | 421651..422247 (-) | Length | 198 a.a. |
| NCBI ID | WP_005297642.1 | Uniprot ID | A0A2T3QMJ2 |
| Organism | Photobacterium damselae strain Phdp Wu-1 | ||
| Function | regulation of Dns (predicted from homology) Competence regulation |
||
Genomic Context
Location: 416651..427247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BST98_RS02050 (BST98_02045) | - | 417743..418756 (+) | 1014 | WP_005297636.1 | Fe(3+) ABC transporter substrate-binding protein | - |
| BST98_RS02055 (BST98_02050) | - | 418912..420537 (+) | 1626 | WP_068945550.1 | ABC transporter permease | - |
| BST98_RS02060 (BST98_02055) | - | 420540..421577 (+) | 1038 | WP_109375387.1 | ABC transporter ATP-binding protein | - |
| BST98_RS02065 (BST98_02060) | opaR | 421651..422247 (-) | 597 | WP_005297642.1 | TetR/AcrR family transcriptional regulator | Regulator |
| BST98_RS02070 (BST98_02065) | hpt | 422468..423004 (+) | 537 | WP_005297644.1 | hypoxanthine phosphoribosyltransferase | - |
| BST98_RS02075 (BST98_02070) | can | 423079..423750 (-) | 672 | WP_005297646.1 | carbonate dehydratase | - |
| BST98_RS02080 (BST98_02075) | - | 423849..424772 (+) | 924 | WP_109374734.1 | ABC transporter ATP-binding protein | - |
| BST98_RS02085 (BST98_02080) | - | 424769..425539 (+) | 771 | WP_109374735.1 | ABC transporter permease | - |
| BST98_RS02090 (BST98_02085) | panC | 425655..426545 (-) | 891 | WP_005297652.1 | pantoate--beta-alanine ligase | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 22812.08 Da Isoelectric Point: 7.1177
>NTDB_id=207854 BST98_RS02065 WP_005297642.1 421651..422247(-) (opaR) [Photobacterium damselae strain Phdp Wu-1]
MDMVIKRTRTRLSPEKRREQLLNSALDVFARRGIGRGGHADIAEMANVSVATVFNYFPTREDLVEQVLIHVESRFNKLLT
HSLNDEMPTAKAKLTNLTDCLIKAVIEQHDWLKVWFEWSTSVRDDIWPLFIKTNKNNLQKLTSVFEQGLTAGEFSRSQSA
SDLAHMFHGTCYVLYLQTHLTLDPEIMQRQADSYLQSL
MDMVIKRTRTRLSPEKRREQLLNSALDVFARRGIGRGGHADIAEMANVSVATVFNYFPTREDLVEQVLIHVESRFNKLLT
HSLNDEMPTAKAKLTNLTDCLIKAVIEQHDWLKVWFEWSTSVRDDIWPLFIKTNKNNLQKLTSVFEQGLTAGEFSRSQSA
SDLAHMFHGTCYVLYLQTHLTLDPEIMQRQADSYLQSL
Nucleotide
Download Length: 597 bp
>NTDB_id=207854 BST98_RS02065 WP_005297642.1 421651..422247(-) (opaR) [Photobacterium damselae strain Phdp Wu-1]
ATGGACATGGTGATTAAGCGTACTCGTACTCGCTTATCTCCAGAAAAACGTCGAGAGCAGCTACTCAATAGCGCACTAGA
TGTTTTTGCTCGTCGTGGTATTGGCCGAGGGGGCCACGCAGATATCGCGGAAATGGCAAATGTCTCTGTTGCGACCGTTT
TCAATTATTTTCCAACTCGCGAAGATTTAGTAGAACAGGTATTAATTCACGTTGAATCTCGTTTCAATAAACTACTGACA
CACTCTCTCAACGATGAAATGCCAACAGCAAAAGCCAAACTGACTAACCTTACCGATTGCTTAATTAAAGCTGTTATAGA
GCAGCACGATTGGCTAAAAGTCTGGTTTGAATGGAGTACATCAGTACGTGATGATATTTGGCCACTGTTTATTAAAACCA
ATAAAAATAACTTACAAAAGTTAACTTCGGTTTTTGAACAGGGATTAACGGCTGGAGAATTTAGCCGCTCTCAATCTGCA
TCAGATTTAGCGCATATGTTTCACGGTACCTGTTATGTGCTGTACTTACAAACGCACCTAACCTTAGACCCTGAAATCAT
GCAGCGACAAGCTGATAGCTATTTACAGAGCCTGTAA
ATGGACATGGTGATTAAGCGTACTCGTACTCGCTTATCTCCAGAAAAACGTCGAGAGCAGCTACTCAATAGCGCACTAGA
TGTTTTTGCTCGTCGTGGTATTGGCCGAGGGGGCCACGCAGATATCGCGGAAATGGCAAATGTCTCTGTTGCGACCGTTT
TCAATTATTTTCCAACTCGCGAAGATTTAGTAGAACAGGTATTAATTCACGTTGAATCTCGTTTCAATAAACTACTGACA
CACTCTCTCAACGATGAAATGCCAACAGCAAAAGCCAAACTGACTAACCTTACCGATTGCTTAATTAAAGCTGTTATAGA
GCAGCACGATTGGCTAAAAGTCTGGTTTGAATGGAGTACATCAGTACGTGATGATATTTGGCCACTGTTTATTAAAACCA
ATAAAAATAACTTACAAAAGTTAACTTCGGTTTTTGAACAGGGATTAACGGCTGGAGAATTTAGCCGCTCTCAATCTGCA
TCAGATTTAGCGCATATGTTTCACGGTACCTGTTATGTGCTGTACTTACAAACGCACCTAACCTTAGACCCTGAAATCAT
GCAGCGACAAGCTGATAGCTATTTACAGAGCCTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| opaR | Vibrio parahaemolyticus RIMD 2210633 |
48.485 |
100 |
0.485 |
| hapR | Vibrio cholerae C6706 |
48.241 |
100 |
0.485 |
| hapR | Vibrio cholerae strain A1552 |
48.241 |
100 |
0.485 |