Detailed information NTG0207837

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: BSR56_RS13870
• Genome accession: NZ_CP018260
• Coordinates: 2842982..2843842 (+)
• Length: 286 a.a.
• NCBI ID: WP_075316304.1
• Uniprot ID: -
• Organism: Acinetobacter haemolyticus strain XH900
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2837982..2848842

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR56_RS13850 (BSR56_13980)	secG	2838507..2838836 (-)	330	WP_004637686.1	preprotein translocase subunit SecG	-
BSR56_RS13855 (BSR56_13985)	tpiA	2838849..2839640 (-)	792	WP_075316302.1	triose-phosphate isomerase	-
BSR56_RS13860 (BSR56_13990)	pilB	2840016..2841731 (+)	1716	WP_075316303.1	type IV-A pilus assembly ATPase PilB	Machinery gene
BSR56_RS13865 (BSR56_13995)	pilC	2841756..2842982 (+)	1227	WP_005083853.1	type II secretion system F family protein	Machinery gene
BSR56_RS13870 (BSR56_14000)	pilD	2842982..2843842 (+)	861	WP_075316304.1	prepilin peptidase	Machinery gene
BSR56_RS13875 (BSR56_14005)	coaE	2843844..2844449 (+)	606	WP_005088002.1	dephospho-CoA kinase	-
BSR56_RS13880 (BSR56_14010)	-	2844446..2845357 (-)	912	WP_017394516.1	DMT family transporter	-
BSR56_RS13890 (BSR56_14020)	rlmB	2845397..2846143 (-)	747	WP_004637678.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
BSR56_RS13895 (BSR56_14025)	-	2846252..2846578 (-)	327	WP_004637677.1	pyrimidine/purine nucleoside phosphorylase	-
BSR56_RS13900 (BSR56_14030)	recN	2846912..2848573 (+)	1662	WP_008942279.1	DNA repair protein RecN	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32080.40 Da
• Isoelectric Point: 6.4294

>NTDB_id=207837 BSR56_RS13870 WP_075316304.1 2842982..2843842(+) (pilD) [Acinetobacter haemolyticus strain XH900]
MQQFLNYFIENPTALYLAVGLFSLCIGSFLNVVIFRTPRMMEQEWQQECQMLLHPEQPIIEEEKLTLSQPASTCPKCHTP
IRWYQNIPVISWLVLRGKCGACQNPISIRYPLIELLTMGCSLVVIAVFGPTLQMLFGLVLTWVLITLTFIDFDTQLLPDR
FTLPLAALGLAINSFAIYTTANSAIWGYVIGFLCLWIVYYLFKIFTGKEGMGYGDFKLLAALGAWMGPMLLPLIVLLSSV
VGAIIGIILLKMRGENQPFAFGPYIAIAGWIAFLWGDQIMKVYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=207837 BSR56_RS13870 WP_075316304.1 2842982..2843842(+) (pilD) [Acinetobacter haemolyticus strain XH900]
ATGCAGCAATTCTTAAATTATTTTATCGAAAACCCAACTGCACTTTATCTAGCAGTTGGGCTTTTTAGTTTATGTATTGG
TAGCTTTCTGAATGTTGTTATTTTCCGAACGCCAAGAATGATGGAGCAGGAATGGCAACAAGAATGCCAAATGCTACTCC
ATCCAGAACAACCTATCATTGAAGAAGAAAAGCTGACTTTAAGTCAACCTGCATCAACTTGCCCTAAGTGCCACACCCCT
ATCCGCTGGTATCAAAATATCCCAGTGATCAGCTGGTTAGTACTCCGTGGTAAATGCGGTGCCTGTCAAAACCCGATTAG
TATTCGTTACCCATTGATCGAGTTATTGACCATGGGATGCTCTCTAGTGGTCATTGCTGTTTTTGGTCCTACCCTCCAAA
TGCTATTCGGTTTAGTTCTGACTTGGGTGTTAATTACCCTTACTTTTATTGATTTTGATACACAATTGCTTCCAGACCGC
TTTACTCTGCCACTGGCAGCACTCGGTTTAGCCATTAATAGCTTTGCGATCTACACCACAGCAAACTCAGCAATTTGGGG
TTATGTGATTGGTTTCCTTTGCCTTTGGATTGTTTATTATCTTTTTAAAATCTTTACTGGCAAAGAGGGTATGGGCTATG
GCGATTTTAAATTACTGGCTGCATTAGGGGCTTGGATGGGTCCAATGCTCTTGCCTTTAATTGTGTTACTTTCTTCTGTT
GTCGGTGCAATTATTGGTATCATCTTATTGAAAATGCGCGGTGAAAATCAGCCCTTTGCTTTTGGCCCCTATATTGCAAT
TGCAGGCTGGATCGCATTTTTATGGGGTGATCAAATTATGAAAGTTTATTTAGGTGGCTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-127)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter nosocomialis M2	84.615	100	0.846
pilD	Acinetobacter baumannii D1279779	83.566	100	0.836
pilD	Vibrio cholerae strain A1552	55.97	93.706	0.524
pilD	Vibrio campbellii strain DS40M4	54.135	93.007	0.503
pilD	Neisseria gonorrhoeae MS11	47.253	95.455	0.451