Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BSR56_RS12065 Genome accession   NZ_CP018260
Coordinates   2457141..2457524 (-) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter haemolyticus strain XH900     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2452141..2462524
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR56_RS16645 - 2452474..2453886 (-) 1413 Protein_2330 Hpt domain-containing protein -
  BSR56_RS12050 (BSR56_12155) - 2454044..2456125 (-) 2082 WP_004640623.1 methyl-accepting chemotaxis protein -
  BSR56_RS12055 (BSR56_12160) - 2456173..2456708 (-) 536 Protein_2332 chemotaxis protein CheW -
  BSR56_RS12060 (BSR56_12165) - 2456757..2457119 (-) 363 WP_004640626.1 PleD family two-component system response regulator -
  BSR56_RS12065 (BSR56_12170) pilG 2457141..2457524 (-) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  BSR56_RS12070 (BSR56_12175) - 2457803..2458459 (+) 657 WP_075314912.1 hypothetical protein -
  BSR56_RS12075 (BSR56_12180) - 2458662..2460377 (+) 1716 WP_005089277.1 proline--tRNA ligase -
  BSR56_RS12080 (BSR56_12185) - 2460439..2460774 (-) 336 WP_004640635.1 YegP family protein -
  BSR56_RS12085 (BSR56_12190) - 2460934..2461278 (-) 345 WP_005089274.1 zinc ribbon domain-containing protein YjdM -
  BSR56_RS12090 (BSR56_12195) - 2461465..2461911 (-) 447 WP_100833965.1 SRPBCC family protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=207830 BSR56_RS12065 WP_004640629.1 2457141..2457524(-) (pilG) [Acinetobacter haemolyticus strain XH900]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=207830 BSR56_RS12065 WP_004640629.1 2457141..2457524(-) (pilG) [Acinetobacter haemolyticus strain XH900]
ATGGAAGATAAATTTCAAAATTTAAAGGTGATGGTGATTGACGATTCTAAAACGATTCGTCGTACAGCTGAGACCTTATT
ACAACGTGAAGGTTGTGAGGTAATTACTGCAGTTGACGGTTTTGAAGCATTATCAAAAATTGCTGAAGCAAATCCAGATA
TTGTTTTTGTGGATATTATGATGCCGCGTTTAGACGGTTATCAAACCTGTGCATTGATCAAGAATTCATTAAATTATCAA
AATATTCCAGTCATCATGCTTTCAAGCAAAGACGGTTTATTTGATCAAGCAAAAGGGCGTGTTGTGGGGTCTGATGAATA
TTTAACTAAGCCGTTTAGTAAGGATGAGCTGTTGAGTGCGATCCGTAACCATGTCAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37

Multiple sequence alignment