Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilS   Type   Regulator
Locus tag   BSR55_RS19650 Genome accession   NZ_CP018259
Coordinates   4152538..4154106 (+) Length   522 a.a.
NCBI ID   WP_100886095.1    Uniprot ID   -
Organism   Acinetobacter bereziniae strain XH901     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4147538..4159106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR55_RS19630 (BSR55_19630) - 4147761..4149065 (+) 1305 WP_005035343.1 homoserine dehydrogenase -
  BSR55_RS19635 (BSR55_19635) thrC 4149219..4150358 (+) 1140 WP_046759909.1 threonine synthase -
  BSR55_RS19640 (BSR55_19640) pbpG 4150581..4151633 (-) 1053 WP_004826319.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  BSR55_RS19645 (BSR55_19645) - 4151866..4152501 (+) 636 WP_004718392.1 response regulator -
  BSR55_RS19650 (BSR55_19650) pilS 4152538..4154106 (+) 1569 WP_100886095.1 sensor histidine kinase Regulator
  BSR55_RS19655 (BSR55_19655) pilR 4154124..4155539 (+) 1416 WP_100886096.1 sigma-54-dependent transcriptional regulator Regulator
  BSR55_RS19660 (BSR55_19660) - 4155638..4156810 (-) 1173 WP_100886097.1 S41 family peptidase -
  BSR55_RS19665 (BSR55_19665) gpmI 4156839..4158386 (-) 1548 WP_100886098.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase -

Sequence

Protein


Download         Length: 522 a.a.        Molecular weight: 59376.05 Da        Isoelectric Point: 5.9597

>NTDB_id=207805 BSR55_RS19650 WP_100886095.1 4152538..4154106(+) (pilS) [Acinetobacter bereziniae strain XH901]
MSSTVSVPIYQTIYRLGTLYSGYRLIIAFCLIIIFLITLENQPVHYEYPSLYFYSIATFTIIAALQMMLLKFYPHGVAQQ
FIGFFIVDIPFLSILVFALNGPNLAISILFVIAVFTANFLLSKNKALFITLVSVIAIIYQQFLGSYFDFSNLNNISNSAL
LAFLFFMVYGIGQIAINRFQVLESLNTYQSLELFKLQNINRYILEQIEVGYLVLDEKCKIIVSNPAACSLLGISPLYAHE
QYHLSNFQPDLYEILKDAMFRDGERFQFESQQSSFTVDIRVQKLIVPHQALTLLVLEDAQKINQKVQQLKLAALGQLSAS
IAHEIRNPLAAITQANDLFLMSDEQQQALLHQMITKQTVRINSIIKDTLDMAKNKKTHASQIDLPLFLEDLLLHDLSDAQ
AKIQTEIEANLVIYFDDSQLRQVLVNLLRNALRHNDQNAEYVLVKAFKNDAHICIDVIDYGKGVTKQDLSQLFQPFFSTE
INGTGLGLYLSQTICEANQAKLIYVEQKQQGACFRIECPRMD

Nucleotide


Download         Length: 1569 bp        

>NTDB_id=207805 BSR55_RS19650 WP_100886095.1 4152538..4154106(+) (pilS) [Acinetobacter bereziniae strain XH901]
ATGTCGTCTACGGTATCTGTGCCTATTTATCAAACAATTTACCGTCTAGGCACACTTTACTCAGGTTATCGACTGATTAT
TGCCTTTTGTTTAATCATTATTTTTCTGATTACCTTAGAAAATCAGCCTGTTCACTACGAATACCCAAGTTTATATTTTT
ATTCGATCGCGACCTTTACCATCATTGCAGCATTGCAAATGATGCTGTTGAAATTTTACCCTCATGGCGTTGCACAGCAG
TTTATTGGCTTTTTTATTGTTGATATTCCATTCCTCAGTATCTTGGTATTTGCGCTGAATGGTCCAAATTTAGCCATCAG
TATTTTATTTGTGATTGCAGTCTTTACTGCAAATTTTTTACTGAGTAAAAACAAAGCATTATTTATTACCTTAGTGTCTG
TCATTGCCATTATCTATCAGCAATTTCTGGGCAGTTATTTTGATTTTTCTAATTTAAATAATATTAGTAATAGTGCCTTA
TTGGCTTTCTTGTTTTTTATGGTGTACGGAATCGGGCAAATTGCAATCAACCGTTTTCAGGTTCTTGAGTCCTTAAATAC
GTACCAATCTTTAGAGCTTTTTAAGCTACAAAACATCAACCGCTATATTTTAGAACAAATCGAAGTCGGTTATTTGGTAC
TCGATGAAAAATGTAAAATTATTGTCAGTAATCCTGCCGCATGTTCACTATTAGGAATATCTCCCCTGTATGCACATGAA
CAATATCACTTATCCAATTTCCAGCCTGATCTCTATGAAATTTTAAAAGATGCCATGTTTCGAGATGGTGAGCGTTTTCA
ATTTGAATCACAGCAATCTTCATTTACCGTTGATATTCGGGTACAAAAACTGATTGTTCCACATCAGGCGCTCACACTTC
TTGTACTTGAAGATGCACAAAAAATAAATCAAAAGGTACAACAGCTTAAACTTGCAGCATTGGGACAATTATCAGCAAGT
ATTGCTCATGAGATACGTAATCCACTCGCTGCCATTACGCAGGCAAATGATCTTTTTCTGATGAGTGATGAACAGCAGCA
AGCCTTACTCCATCAAATGATTACCAAGCAGACTGTCCGTATTAACAGTATTATCAAAGATACTTTAGATATGGCAAAAA
ACAAAAAAACCCATGCCAGTCAAATCGACTTACCGCTATTTTTAGAAGATTTATTGTTACACGATTTAAGTGATGCTCAA
GCTAAAATCCAAACTGAAATTGAAGCAAATCTTGTGATTTATTTTGATGATTCGCAATTAAGGCAAGTACTTGTCAATCT
ATTGCGTAATGCATTACGCCATAATGATCAAAATGCGGAATACGTTTTGGTCAAGGCGTTTAAAAATGACGCACATATTT
GTATAGATGTGATTGATTATGGGAAAGGGGTCACAAAACAAGATCTTTCACAATTATTTCAGCCATTTTTTAGTACCGAA
ATCAATGGAACTGGTTTAGGATTGTACCTATCGCAAACTATATGCGAAGCAAATCAAGCGAAATTAATTTACGTTGAGCA
AAAACAACAAGGGGCATGCTTTCGTATCGAATGCCCACGCATGGATTAG

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(313-374)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(416-519)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilS Acinetobacter baumannii strain A118

58.431

97.701

0.571

Multiple sequence alignment