Detailed information    

insolico Bioinformatically predicted

Overview

Name   comC/comC1   Type   Regulator
Locus tag   CO687_RS03070 Genome accession   NZ_CP023511
Coordinates   641454..641618 (+) Length   54 a.a.
NCBI ID   WP_080998577.1    Uniprot ID   O33645
Organism   Streptococcus gordonii strain FDAARGOS_371     
Function   binding to ComD; induce autophosphorylation of ComD (predicted from homology)   
Competence regulation

Genomic Context

Location: 636454..646618
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO687_RS03045 (CO687_03045) dnaA 636916..638268 (-) 1353 WP_008808037.1 chromosomal replication initiator protein DnaA -
  CO687_RS03050 (CO687_03050) spo0J 638472..639236 (-) 765 WP_008808036.1 ParB/RepB/Spo0J family partition protein Regulator
  CO687_RS03055 (CO687_03055) htrA 639302..640495 (-) 1194 WP_008808035.1 S1C family serine protease Regulator
  CO687_RS03060 (CO687_03060) rlmH 640689..641168 (+) 480 WP_008808034.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CO687_RS03070 (CO687_03070) comC/comC1 641454..641618 (+) 165 WP_080998577.1 bacteriocin Regulator
  CO687_RS03075 (CO687_03075) comD/comD2 641631..642992 (+) 1362 WP_301335837.1 competence system sensor histidine kinase ComD Regulator
  CO687_RS03080 (CO687_03080) comE/comE2 642989..643756 (+) 768 WP_008808031.1 competence system response regulator transcription factor ComE Regulator
  CO687_RS03095 (CO687_03095) ychF 644078..645193 (+) 1116 WP_008808030.1 redox-regulated ATPase YchF -
  CO687_RS03100 (CO687_03100) pth 645267..645836 (+) 570 WP_096754921.1 aminoacyl-tRNA hydrolase -

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6369.44 Da        Isoelectric Point: 11.2504

>NTDB_id=207797 CO687_RS03070 WP_080998577.1 641454..641618(+) (comC/comC1) [Streptococcus gordonii strain FDAARGOS_371]
MKKKNKQNLLPKELQQFEILTDNKLQTVIGGSQKGVYASQRSFVPSWFRKIFRN

Nucleotide


Download         Length: 165 bp        

>NTDB_id=207797 CO687_RS03070 WP_080998577.1 641454..641618(+) (comC/comC1) [Streptococcus gordonii strain FDAARGOS_371]
ATGAAAAAGAAAAACAAACAAAATTTATTGCCAAAAGAGTTACAACAATTTGAAATTTTGACAGATAATAAACTTCAAAC
AGTCATTGGGGGATCTCAAAAAGGTGTTTATGCCAGTCAGAGATCATTTGTTCCAAGTTGGTTCCGTAAAATTTTTAGAA
ATTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O33645

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comC/comC1 Streptococcus gordonii str. Challis substr. CH1

55.556

100

0.556
  comC/comC2 Streptococcus gordonii strain NCTC7865

81.25

59.259

0.481

Multiple sequence alignment