Detailed information NTG0207756

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CO686_RS09070
• Genome accession: NZ_CP023507
• Coordinates: 1848679..1849776 (+)
• Length: 365 a.a.
• NCBI ID: WP_000266687.1
• Uniprot ID: -
• Organism: Streptococcus oralis strain FDAARGOS_367
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1843679..1854776

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CO686_RS09045 (CO686_09045)	pgsA	1844204..1844749 (-)	546	WP_049501297.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
CO686_RS09050 (CO686_09050)	rodZ	1844760..1845581 (-)	822	WP_049501296.1	cytoskeleton protein RodZ	-
CO686_RS09055 (CO686_09055)	-	1845617..1846900 (-)	1284	WP_000170125.1	pitrilysin family protein	-
CO686_RS09060 (CO686_09060)	-	1846897..1848147 (-)	1251	WP_000424564.1	pitrilysin family protein	-
CO686_RS09065 (CO686_09065)	yaaA	1848308..1848676 (+)	369	WP_000455880.1	S4 domain-containing protein YaaA	-
CO686_RS09070 (CO686_09070)	recF	1848679..1849776 (+)	1098	WP_000266687.1	DNA replication/repair protein RecF	Machinery gene
CO686_RS09075 (CO686_09075)	guaB	1849829..1851307 (-)	1479	WP_000073416.1	IMP dehydrogenase	-
CO686_RS09080 (CO686_09080)	trpS	1851470..1852495 (-)	1026	WP_000165451.1	tryptophan--tRNA ligase	-
CO686_RS09085 (CO686_09085)	-	1852691..1854313 (+)	1623	WP_000958793.1	ATP-binding cassette domain-containing protein	-

Sequence

Protein

• Length: 365 a.a.
• Molecular weight: 41979.13 Da
• Isoelectric Point: 9.4718

>NTDB_id=207756 CO686_RS09070 WP_000266687.1 1848679..1849776(+) (recF) [Streptococcus oralis strain FDAARGOS_367]
MWLQHLTIKTFRNYKEAKIDFNPKLNVFLGQNAQGKTNILEAIYFLALTRSHRTRTDKNLIHFDNEQLHLSGLLQKKTSS
IPLEIDLTPKGRVTKVNHLKQARLSDYIGHMNVVLFAPEDLQLIKGAPSVRRKFIDIELGQIKPIYLSDLSNYNHILKQR
NTYLKSSQKIDETFLSVLDDQLIDYGCRVIKHRIKFIKDLEKFGQKKHLEISNKLEELSISYQSSVNFTNEEQLTSSFKI
ALDKSRSRDLFKKNTGVGPHRDDISFYINGMDASFGSQGQHRSLVLSIKLAEIELMESITNESPILLLDDVMSELDNTRQ
LKLLETISQSIQTFITTTSLDHLQNLPENLSIFNIQNGKISVNQH

Nucleotide

• Length: 1098 bp

>NTDB_id=207756 CO686_RS09070 WP_000266687.1 1848679..1849776(+) (recF) [Streptococcus oralis strain FDAARGOS_367]
ATGTGGCTCCAACATTTAACAATTAAAACCTTTCGAAACTACAAAGAGGCAAAAATTGATTTCAATCCAAAATTAAATGT
CTTTCTAGGTCAAAATGCACAAGGAAAAACCAATATTCTAGAGGCAATCTATTTCTTAGCCTTGACACGTAGTCATCGGA
CTCGTACAGATAAAAATCTCATTCATTTTGATAACGAGCAACTCCATCTTTCTGGCTTGCTACAGAAAAAAACAAGCTCT
ATCCCTCTAGAAATTGATTTAACACCAAAAGGGCGTGTGACTAAGGTCAATCACTTAAAACAAGCGCGCCTATCAGACTA
CATTGGACATATGAATGTTGTCCTCTTCGCGCCTGAAGATCTCCAGCTAATTAAGGGAGCACCTTCTGTCCGTCGAAAGT
TTATAGACATCGAACTGGGACAAATTAAACCAATCTACTTGTCAGACTTGTCAAACTATAACCATATACTCAAGCAGAGA
AATACTTACCTAAAATCCAGCCAAAAGATTGATGAAACATTTCTGTCAGTCTTAGATGATCAGTTAATAGATTATGGTTG
TCGCGTTATAAAGCATCGGATAAAATTCATTAAAGACTTAGAGAAATTTGGCCAAAAAAAACACTTAGAAATTTCAAATA
AATTAGAAGAACTGTCAATATCTTATCAATCATCTGTCAACTTCACTAATGAAGAACAGCTAACAAGTTCCTTTAAAATT
GCTTTAGATAAAAGCAGATCCAGAGATTTATTTAAAAAGAATACTGGAGTTGGCCCTCATCGAGATGATATTTCTTTTTA
TATCAATGGTATGGATGCTAGTTTTGGAAGCCAAGGTCAACATCGTAGCCTTGTTCTTTCTATAAAACTGGCGGAAATTG
AGCTAATGGAAAGTATTACCAATGAGTCTCCGATACTACTGCTTGATGATGTTATGAGCGAACTTGACAATACACGGCAA
CTAAAATTACTAGAAACCATTTCTCAATCTATCCAAACCTTTATTACAACAACAAGTTTAGACCACTTACAAAACTTGCC
AGAAAACCTTAGTATTTTCAACATTCAAAATGGTAAAATTTCTGTAAATCAACATTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	89.256	99.452	0.888
recF	Bacillus subtilis subsp. subtilis str. 168	45.38	100	0.458