Detailed information NTG0020714

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: AYT26_RS14590
• Genome accession: NC_002570
• Coordinates: 3004078..3004971 (-)
• Length: 297 a.a.
• NCBI ID: WP_050768984.1
• Uniprot ID: -
• Organism: Halalkalibacterium halodurans C-125
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 2999078..3009971

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AYT26_RS14555 (BH2882)	fabF	2999273..3000508 (-)	1236	WP_010899029.1	beta-ketoacyl-ACP synthase II	-
AYT26_RS14560 (BH2883)	-	3000546..3001484 (-)	939	WP_010899030.1	beta-ketoacyl-ACP synthase III	-
AYT26_RS14565 (BH2884)	-	3001707..3002006 (+)	300	WP_010899031.1	hypothetical protein	-
AYT26_RS14570 (BH2885)	-	3002102..3002356 (-)	255	WP_010899032.1	hypothetical protein	-
AYT26_RS14575 (BH2886)	-	3002425..3002754 (-)	330	WP_010899033.1	hypothetical protein	-
AYT26_RS14580 (BH2887)	-	3002835..3003620 (-)	786	WP_010899034.1	class I SAM-dependent methyltransferase	-
AYT26_RS14585 (BH_RS14585)	comZ	3003806..3003985 (-)	180	WP_041821709.1	ComZ family protein	Regulator
AYT26_RS14590 (BH2889)	med	3004078..3004971 (-)	894	WP_050768984.1	BMP family ABC transporter substrate-binding protein	Regulator
AYT26_RS21965	-	3004958..3005029 (-)	72	WP_420889584.1	lipoprotein	-
AYT26_RS21130	-	3005213..3005386 (-)	174	WP_010899037.1	hypothetical protein	-
AYT26_RS14595 (BH2891)	-	3005432..3006337 (-)	906	WP_010899038.1	NAD-dependent epimerase/dehydratase family protein	-
AYT26_RS14600 (BH2892)	-	3006369..3007115 (-)	747	WP_010899039.1	alpha/beta hydrolase family protein	-
AYT26_RS14605 (BH2893)	-	3007672..3007851 (-)	180	WP_010899040.1	YjzC family protein	-
AYT26_RS14610 (BH2894)	argF	3007904..3008863 (-)	960	WP_010899041.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 297 a.a.
• Molecular weight: 33136.69 Da
• Isoelectric Point: 4.1539

>NTDB_id=20714 AYT26_RS14590 WP_050768984.1 3004078..3004971(-) (med) [Halalkalibacterium halodurans C-125]
MPTDRELMVGLLVEDTIDDQGWNRKAYEGLLNIHSNLDVDVVLEEGVNSEQKAHRRIKELVDGGVNLIFGHGHAFAEYFS
TIHNQYPDVHFVSFNGEVKGENITSLHFEGYAMGYFGGMVAASMSETHKVGVIAAFPWQPEVEGFVDGAKYMNESEAFVR
YVGEWTDADKALELFQELQKEQVDVFYPAGDGYHVPVVEAIKDQGDFAIGYVGDQADLGGSTILTSTVQHVDDLYVLVAK
RFQEGKLESGNLYYDFQDGVVSLGEFSSVVPDEVREQITDAISTYIQTGQFPHEEER

Nucleotide

• Length: 894 bp

>NTDB_id=20714 AYT26_RS14590 WP_050768984.1 3004078..3004971(-) (med) [Halalkalibacterium halodurans C-125]
ATGCCAACAGATAGAGAATTAATGGTAGGATTGTTAGTCGAAGATACCATCGATGACCAAGGCTGGAATCGAAAGGCTTA
TGAAGGATTGCTAAATATTCATAGCAACTTAGATGTAGATGTTGTCTTAGAAGAAGGTGTGAACAGTGAGCAAAAAGCCC
ACCGACGAATAAAAGAATTAGTTGATGGTGGGGTAAATCTTATTTTTGGACACGGACATGCCTTCGCCGAATATTTCTCG
ACCATACATAATCAATACCCAGATGTGCACTTTGTAAGCTTTAATGGAGAAGTGAAGGGTGAAAATATAACAAGCCTTCA
TTTTGAAGGGTACGCGATGGGCTACTTTGGTGGTATGGTGGCAGCAAGCATGAGTGAGACTCATAAGGTCGGCGTCATTG
CAGCATTCCCATGGCAGCCTGAAGTAGAAGGATTTGTCGATGGTGCTAAGTACATGAATGAATCGGAAGCCTTTGTTCGG
TACGTAGGAGAATGGACAGATGCTGACAAGGCACTAGAGTTATTTCAGGAATTGCAAAAAGAGCAGGTTGATGTTTTTTA
TCCTGCAGGGGATGGCTACCATGTCCCAGTCGTTGAAGCGATTAAAGATCAAGGAGATTTTGCTATTGGGTATGTCGGGG
ATCAAGCCGATTTAGGAGGGTCTACAATTTTAACGAGCACCGTCCAGCATGTCGATGATTTATATGTACTCGTAGCGAAA
CGGTTCCAAGAAGGGAAACTAGAATCAGGGAACTTATATTATGACTTTCAAGATGGAGTCGTATCTCTTGGGGAGTTTAG
CTCGGTTGTTCCAGATGAAGTAAGAGAGCAAATAACAGATGCCATCTCGACCTATATTCAAACGGGTCAATTTCCACATG
AGGAAGAACGTTAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (9-293)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	50	96.97	0.485