Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   AYT26_RS14585 Genome accession   NC_002570
Coordinates   3003806..3003985 (-) Length   59 a.a.
NCBI ID   WP_041821709.1    Uniprot ID   A0A0M0KMW0
Organism   Halalkalibacterium halodurans C-125     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 2998806..3008985
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AYT26_RS14555 (BH2882) fabF 2999273..3000508 (-) 1236 WP_010899029.1 beta-ketoacyl-ACP synthase II -
  AYT26_RS14560 (BH2883) - 3000546..3001484 (-) 939 WP_010899030.1 beta-ketoacyl-ACP synthase III -
  AYT26_RS14565 (BH2884) - 3001707..3002006 (+) 300 WP_010899031.1 hypothetical protein -
  AYT26_RS14570 (BH2885) - 3002102..3002356 (-) 255 WP_010899032.1 hypothetical protein -
  AYT26_RS14575 (BH2886) - 3002425..3002754 (-) 330 WP_010899033.1 hypothetical protein -
  AYT26_RS14580 (BH2887) - 3002835..3003620 (-) 786 WP_010899034.1 class I SAM-dependent methyltransferase -
  AYT26_RS14585 (BH_RS14585) comZ 3003806..3003985 (-) 180 WP_041821709.1 ComZ family protein Regulator
  AYT26_RS14590 (BH2889) med 3004078..3004971 (-) 894 WP_050768984.1 BMP family ABC transporter substrate-binding protein Regulator
  AYT26_RS21965 - 3004958..3005029 (-) 72 WP_420889584.1 lipoprotein -
  AYT26_RS21130 - 3005213..3005386 (-) 174 WP_010899037.1 hypothetical protein -
  AYT26_RS14595 (BH2891) - 3005432..3006337 (-) 906 WP_010899038.1 NAD-dependent epimerase/dehydratase family protein -
  AYT26_RS14600 (BH2892) - 3006369..3007115 (-) 747 WP_010899039.1 alpha/beta hydrolase family protein -
  AYT26_RS14605 (BH2893) - 3007672..3007851 (-) 180 WP_010899040.1 YjzC family protein -
  AYT26_RS14610 (BH2894) argF 3007904..3008863 (-) 960 WP_010899041.1 ornithine carbamoyltransferase -

Sequence

Protein


Download         Length: 59 a.a.        Molecular weight: 6848.86 Da        Isoelectric Point: 3.8598

>NTDB_id=20713 AYT26_RS14585 WP_041821709.1 3003806..3003985(-) (comZ) [Halalkalibacterium halodurans C-125]
MQFMQIAMKHLPEGKAFLDEKGIELSMEEMQPMLQLLMNVMNEAYELGWEDAQQSQNDG

Nucleotide


Download         Length: 180 bp        

>NTDB_id=20713 AYT26_RS14585 WP_041821709.1 3003806..3003985(-) (comZ) [Halalkalibacterium halodurans C-125]
ATGCAATTCATGCAAATTGCGATGAAGCATCTTCCGGAGGGAAAAGCGTTTCTCGACGAAAAAGGAATTGAGCTATCGAT
GGAAGAGATGCAGCCAATGCTGCAACTTTTAATGAACGTTATGAATGAAGCCTATGAGTTAGGCTGGGAAGACGCACAGC
AAAGCCAAAATGATGGATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(1-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0M0KMW0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

58.491

89.831

0.525

Multiple sequence alignment