Detailed information NTG0207120

Bioinformatically predicted

Overview

• Name: med
• Type: Regulator
• Locus tag: BSO20_RS06265
• Genome accession: NZ_CP018200
• Coordinates: 1383499..1384452 (-)
• Length: 317 a.a.
• NCBI ID: WP_007610578.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain WS-8
• Function: regulation of regulators (predicted from homology) Competence regulation

Genomic Context

Location: 1378499..1389452

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSO20_RS06235 (BSO20_06240)	-	1378653..1379639 (-)	987	WP_029325950.1	ABC transporter ATP-binding protein	-
BSO20_RS06240 (BSO20_06245)	-	1379813..1380598 (-)	786	WP_029325951.1	DUF2268 domain-containing protein	-
BSO20_RS06245 (BSO20_06250)	fabF	1380681..1381919 (-)	1239	WP_032874451.1	beta-ketoacyl-ACP synthase II	-
BSO20_RS06250 (BSO20_06255)	-	1381942..1382880 (-)	939	WP_007409122.1	beta-ketoacyl-ACP synthase III	-
BSO20_RS06255 (BSO20_06260)	-	1383048..1383266 (+)	219	WP_032874450.1	hypothetical protein	-
BSO20_RS06260 (BSO20_06265)	comZ	1383295..1383486 (-)	192	WP_003155061.1	ComZ family protein	Regulator
BSO20_RS06265 (BSO20_06270)	med	1383499..1384452 (-)	954	WP_007610578.1	BMP family ABC transporter substrate-binding protein	Regulator
BSO20_RS06270 (BSO20_06275)	-	1384542..1385108 (-)	567	WP_032874449.1	hypothetical protein	-
BSO20_RS06275 (BSO20_06280)	-	1385191..1385925 (-)	735	WP_032874448.1	hypothetical protein	-
BSO20_RS06285 (BSO20_06290)	-	1386184..1386369 (+)	186	WP_032874447.1	YjzD family protein	-
BSO20_RS06290 (BSO20_06295)	-	1386406..1386585 (-)	180	WP_003155070.1	YjzC family protein	-
BSO20_RS06295 (BSO20_06300)	argF	1386661..1387632 (-)	972	WP_032874446.1	ornithine carbamoyltransferase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 35357.02 Da
• Isoelectric Point: 4.6686

>NTDB_id=207120 BSO20_RS06265 WP_007610578.1 1383499..1384452(-) (med) [Bacillus amyloliquefaciens strain WS-8]
MITRLVMIFSLLLLLSGCAQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKTNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHNFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNRTNELPSNE

Nucleotide

• Length: 954 bp

>NTDB_id=207120 BSO20_RS06265 WP_007610578.1 1383499..1384452(-) (med) [Bacillus amyloliquefaciens strain WS-8]
TTGATCACCAGGCTTGTCATGATCTTTTCTCTCCTCCTTTTATTGAGCGGATGCGCACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTTCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGACAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGCTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAACCAATGAGGTCGGCGTCATCGCCTCCTTTTTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAAAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACAACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCTCTGGTGGACA
AAGCATTTCAAGACAAAATCTCAGACCTTGTAAAAACGTATAACCGAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

• ABC transporter substrate-binding protein PnrA-like (Bmp) (27-317)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
med	Bacillus subtilis subsp. subtilis str. 168	78.233	100	0.782