Detailed information    

insolico Bioinformatically predicted

Overview


Name   vraS   Type   Regulator
Locus tag   BK815_RS00905 Genome accession   NZ_CP018199
Coordinates   180526..181569 (+) Length   347 a.a.
NCBI ID   WP_046837882.1    Uniprot ID   A0A1S2MGQ4
Organism   Staphylococcus succinus strain 14BME20     
Function   repress expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context


Location: 175526..186569
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK815_RS00880 - 176594..177313 (+) 720 WP_073504114.1 type 1 glutamine amidotransferase -
  BK815_RS00885 - 177407..178393 (-) 987 WP_073504115.1 FUSC family protein -
  BK815_RS00890 map 178568..179320 (+) 753 WP_073504116.1 type I methionyl aminopeptidase -
  BK815_RS00895 - 179425..179811 (+) 387 WP_073504117.1 hypothetical protein -
  BK815_RS00900 liaF 179828..180529 (+) 702 WP_073504118.1 cell wall-active antibiotics response protein LiaF -
  BK815_RS00905 vraS 180526..181569 (+) 1044 WP_046837882.1 sensor histidine kinase Regulator
  BK815_RS00910 vraR 181559..182188 (+) 630 WP_046837881.1 response regulator transcription factor Regulator
  BK815_RS00915 - 182384..183529 (-) 1146 WP_073504119.1 YihY/virulence factor BrkB family protein -
  BK815_RS00920 - 183745..184029 (-) 285 WP_046837879.1 hypothetical protein -
  BK815_RS00925 - 184029..184499 (-) 471 WP_073504120.1 low molecular weight protein-tyrosine-phosphatase -
  BK815_RS00930 - 184654..184836 (+) 183 WP_083578856.1 DUF1128 family protein -
  BK815_RS00935 - 184852..186093 (+) 1242 WP_073504122.1 aminopeptidase -

Sequence


Protein


Download         Length: 347 a.a.        Molecular weight: 40023.42 Da        Isoelectric Point: 6.2448

>NTDB_id=207064 BK815_RS00905 WP_046837882.1 180526..181569(+) (vraS) [Staphylococcus succinus strain 14BME20]
MNHYLRAIGSMLILVYSTFFAIFFIDKVFVNIMYFQGMFYTQIFGIPVLLFLNLLVILLCIIVGSVLAYKINQQNHWLQE
QIERSIEGQTVGINDQNIELYNETIELYQTLVPLNQEVHKLRMKTQNLTNESYNINDVKVKKIIEDERQRLARELHDSVS
QQLFAASMMLSAIKESQLEAPLDQQIPVLEKMIQDSQLEMRALLLHLRPLGLKDKSLGEGIKDLVVDLQKKVPMKVVHDI
EEFKVPKGIEDHLFRITQEAISNTLRHSKGTKVTIELFNRTDYLLLRIQDNGKGFNVDEKAEQSYGLKNMRERALEIGAT
YHIVSLPDSGTRIEVKAPLNKEDSYAD

Nucleotide


Download         Length: 1044 bp        

>NTDB_id=207064 BK815_RS00905 WP_046837882.1 180526..181569(+) (vraS) [Staphylococcus succinus strain 14BME20]
ATGAATCACTACTTAAGAGCAATAGGATCCATGTTAATTTTAGTCTATAGTACATTTTTCGCGATATTCTTTATTGATAA
AGTCTTTGTAAACATCATGTACTTTCAAGGTATGTTTTATACACAAATATTTGGAATACCAGTTTTACTATTTTTAAATT
TATTGGTTATATTGCTCTGTATTATAGTAGGATCAGTATTAGCTTATAAAATTAATCAACAGAACCATTGGTTACAAGAA
CAAATTGAACGTTCTATAGAAGGTCAAACTGTAGGGATTAATGATCAAAATATAGAGTTGTATAATGAAACGATAGAATT
ATATCAAACGCTTGTACCATTAAACCAAGAAGTGCACAAATTAAGAATGAAAACACAAAATTTGACGAATGAATCTTATA
ATATCAACGATGTAAAGGTTAAAAAGATTATAGAAGATGAACGACAAAGACTAGCGCGTGAATTACATGATTCTGTAAGC
CAACAATTATTTGCTGCAAGTATGATGCTTTCTGCTATCAAAGAATCCCAATTAGAAGCACCTTTGGATCAACAAATTCC
AGTACTTGAAAAGATGATACAAGACTCTCAATTAGAGATGAGAGCACTATTATTACACTTAAGACCACTCGGCTTAAAAG
ATAAATCGTTAGGTGAAGGGATTAAAGATTTAGTTGTAGATCTACAGAAAAAAGTGCCGATGAAAGTTGTCCATGATATC
GAAGAGTTTAAAGTACCAAAGGGTATTGAAGATCATTTGTTTAGAATTACACAAGAAGCAATTTCTAATACTTTGAGACA
TTCTAAGGGCACTAAGGTTACGATTGAATTGTTTAATAGAACAGATTATTTGCTATTGCGTATACAAGATAATGGTAAAG
GGTTTAATGTAGATGAAAAGGCTGAACAAAGTTATGGGTTGAAAAATATGAGAGAACGCGCATTGGAAATTGGCGCTACA
TATCATATTGTATCTTTACCAGACTCGGGAACGAGGATAGAAGTTAAGGCACCATTAAATAAGGAGGATTCATATGCCGA
TTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1S2MGQ4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vraS Staphylococcus aureus N315

88.184

100

0.882


Multiple sequence alignment