Detailed information NTG0206890

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: BSR20_RS00995
• Genome accession: NZ_CP018189
• Coordinates: 176997..178037 (+)
• Length: 346 a.a.
• NCBI ID: WP_014633662.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 171997..183037

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR20_RS00980 (BSR20_00975)	-	173250..174896 (+)	1647	WP_045769209.1	peptide ABC transporter substrate-binding protein	-
BSR20_RS00985 (BSR20_00980)	-	175027..175941 (+)	915	WP_045001977.1	ABC transporter permease	-
BSR20_RS00990 (BSR20_00985)	-	175952..176983 (+)	1032	WP_155213976.1	ABC transporter permease	-
BSR20_RS00995 (BSR20_00990)	oppD	176997..178037 (+)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
BSR20_RS01000 (BSR20_00995)	amiF	178039..178977 (+)	939	WP_045769211.1	ABC transporter ATP-binding protein	Regulator
BSR20_RS01005 (BSR20_01000)	-	179099..179458 (+)	360	WP_156209409.1	hypothetical protein	-
BSR20_RS01010 (BSR20_01005)	hslO	179538..180404 (+)	867	WP_156209411.1	Hsp33 family molecular chaperone HslO	-
BSR20_RS01015 (BSR20_01010)	dusB	180397..181374 (+)	978	WP_002883588.1	tRNA dihydrouridine synthase DusB	-
BSR20_RS01020 (BSR20_01015)	-	181538..181981 (+)	444	WP_118057858.1	zinc-dependent MarR family transcriptional regulator	-
BSR20_RS01025 (BSR20_01020)	-	181983..182690 (+)	708	WP_002883613.1	metal ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 38554.29 Da
• Isoelectric Point: 5.2741

>NTDB_id=206890 BSR20_RS00995 WP_014633662.1 176997..178037(+) (oppD) [Streptococcus salivarius strain ICDC3]
MTKETILSVKNLHVNFHTYAGEVKAIRDVNFDLKKGETLAIVGESGSGKSVTTRTLMGLSDKNAEVIGEITFKGRNMQTL
KEQDWVEVRGNDIAMIFQDPMTSLDPTMKIGHQIAEPIMLHAKVSQKEALEMALQLMKDVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAADPEILIADEPTTALDVTIQAQILHLMKKIQEERNSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPKHPYTWGLLNSMPTTETESGSLEAIPGTPPDLLYPPKGDAFAARNAFALDIDYQEEPPMFKVSDTHFAATWLL
DERAPKVTPPSPILKRWEKWSKMKEK

Nucleotide

• Length: 1041 bp

>NTDB_id=206890 BSR20_RS00995 WP_014633662.1 176997..178037(+) (oppD) [Streptococcus salivarius strain ICDC3]
ATGACGAAAGAAACGATTTTAAGTGTAAAAAATCTCCATGTTAATTTTCATACTTACGCTGGAGAAGTAAAAGCGATTCG
TGATGTTAATTTTGACTTAAAAAAAGGTGAAACATTAGCGATTGTTGGTGAGTCTGGTTCAGGAAAATCTGTAACGACAA
GGACACTAATGGGGCTATCAGATAAAAATGCTGAGGTAATTGGAGAAATTACCTTTAAGGGACGCAATATGCAAACCTTG
AAGGAGCAAGATTGGGTTGAAGTTCGTGGAAATGATATTGCTATGATTTTTCAGGATCCTATGACCAGCCTTGACCCTAC
TATGAAAATTGGACACCAAATTGCTGAGCCTATCATGCTTCATGCCAAGGTATCTCAGAAGGAAGCCTTAGAAATGGCTT
TACAATTAATGAAAGATGTTGGTATACCTAATGCTGAAGAACATATAAATGATTATCCTCATCAATGGTCAGGAGGAATG
CGTCAAAGAGCAGTAATTGCCATTGCTCTAGCGGCAGATCCTGAAATTTTGATTGCTGATGAGCCTACGACAGCCTTAGA
TGTAACGATTCAAGCACAAATTCTTCATCTTATGAAAAAAATTCAAGAAGAGCGTAATTCATCTATTATTTTTATTACTC
ATGACTTGGGCGTTGTCGCTGGTATGGCTGATCGTGTAGCGGTAATGTATGCCGGTAAAATTGTGGAATATGGTACTGTG
GATGAGGTTTTCTACAATCCGAAACACCCATACACGTGGGGGCTTCTTAACTCAATGCCTACAACAGAAACAGAATCTGG
TAGTCTAGAAGCTATTCCAGGAACTCCCCCAGACTTACTTTATCCTCCTAAAGGAGATGCCTTTGCTGCTCGAAATGCCT
TTGCTTTAGATATTGATTATCAGGAAGAACCGCCAATGTTTAAAGTATCAGATACGCATTTTGCAGCAACATGGCTCTTA
GATGAACGAGCTCCTAAAGTAACCCCTCCTTCACCAATATTGAAACGATGGGAAAAATGGTCAAAGATGAAGGAGAAATA
A

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	81.105	99.422	0.806
amiE	Streptococcus salivarius strain HSISS4	57.227	97.977	0.561
amiE	Streptococcus thermophilus LMG 18311	56.637	97.977	0.555
amiE	Streptococcus thermophilus LMD-9	56.637	97.977	0.555