Detailed information NTG0206891

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: BSR20_RS01000
• Genome accession: NZ_CP018189
• Coordinates: 178039..178977 (+)
• Length: 312 a.a.
• NCBI ID: WP_045769211.1
• Uniprot ID: -
• Organism: Streptococcus salivarius strain ICDC3
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 173039..183977

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR20_RS00980 (BSR20_00975)	-	173250..174896 (+)	1647	WP_045769209.1	peptide ABC transporter substrate-binding protein	-
BSR20_RS00985 (BSR20_00980)	-	175027..175941 (+)	915	WP_045001977.1	ABC transporter permease	-
BSR20_RS00990 (BSR20_00985)	-	175952..176983 (+)	1032	WP_155213976.1	ABC transporter permease	-
BSR20_RS00995 (BSR20_00990)	oppD	176997..178037 (+)	1041	WP_014633662.1	ABC transporter ATP-binding protein	Regulator
BSR20_RS01000 (BSR20_00995)	amiF	178039..178977 (+)	939	WP_045769211.1	ABC transporter ATP-binding protein	Regulator
BSR20_RS01005 (BSR20_01000)	-	179099..179458 (+)	360	WP_156209409.1	hypothetical protein	-
BSR20_RS01010 (BSR20_01005)	hslO	179538..180404 (+)	867	WP_156209411.1	Hsp33 family molecular chaperone HslO	-
BSR20_RS01015 (BSR20_01010)	dusB	180397..181374 (+)	978	WP_002883588.1	tRNA dihydrouridine synthase DusB	-
BSR20_RS01020 (BSR20_01015)	-	181538..181981 (+)	444	WP_118057858.1	zinc-dependent MarR family transcriptional regulator	-
BSR20_RS01025 (BSR20_01020)	-	181983..182690 (+)	708	WP_002883613.1	metal ABC transporter ATP-binding protein	-
BSR20_RS01030 (BSR20_01025)	-	182683..183495 (+)	813	WP_045769215.1	metal ABC transporter permease	-

Sequence

Protein

• Length: 312 a.a.
• Molecular weight: 35269.06 Da
• Isoelectric Point: 6.5085

>NTDB_id=206891 BSR20_RS01000 WP_045769211.1 178039..178977(+) (amiF) [Streptococcus salivarius strain ICDC3]
MTQERKKLVELKNVSLTFNKGKSNEVKAIDDVSFDIYEGEIFGLVGESGSGKTTIGRSILKLYDIDSGTVTFAGNDISSL
KGKDLHDFRKTAQMIFQDPQASLNGRMKIRDIIAEGIDIHKLAKSKEEREAKVKELINLVGLNEDHLSRYPHEFSGGQRQ
RIGIARALAVNPHFIVADEPISALDVSIQAQVVNLMQKLQHEQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGPADE
IYHNPIHPYTKSLLSAIPEPDPERERKRQHLIYDSSIENDGEKRQMYEIRPGHFVYATEAEAKNYKEEANVN

Nucleotide

• Length: 939 bp

>NTDB_id=206891 BSR20_RS01000 WP_045769211.1 178039..178977(+) (amiF) [Streptococcus salivarius strain ICDC3]
ATGACACAAGAACGTAAGAAGTTAGTAGAATTAAAAAATGTGTCTCTAACTTTTAATAAAGGAAAATCAAACGAAGTTAA
GGCCATTGATGACGTTAGCTTTGATATCTATGAGGGCGAAATTTTCGGCCTAGTTGGAGAATCTGGTTCAGGTAAAACGA
CCATTGGGCGTTCTATTCTAAAGCTTTATGATATTGATTCGGGTACTGTTACCTTTGCTGGTAATGATATATCAAGTTTA
AAAGGGAAAGACCTTCATGATTTCCGTAAGACAGCTCAGATGATTTTTCAAGATCCTCAAGCTAGTCTTAATGGACGAAT
GAAGATTCGTGATATTATTGCTGAGGGGATTGATATTCATAAATTGGCTAAATCCAAGGAAGAACGTGAAGCCAAGGTTA
AAGAACTTATTAATTTGGTGGGATTAAATGAAGATCACTTATCAAGATATCCTCATGAATTTTCTGGTGGTCAGCGTCAA
AGAATTGGTATTGCGCGTGCTTTAGCGGTCAATCCTCATTTTATTGTAGCAGACGAACCTATCTCTGCTTTAGATGTTTC
TATTCAAGCACAAGTAGTTAATTTGATGCAAAAGTTACAACACGAACAGGGGTTAACTTATTTGTTTATTGCACATGACT
TGTCAATGGTTAAATATATATCCGATCGTATTGGTGTAATGCATTGGGGTAAACTTCTTGAGGTAGGACCAGCAGATGAG
ATTTACCATAATCCGATCCATCCTTATACAAAGAGTTTATTGTCTGCCATTCCAGAACCAGACCCAGAAAGAGAGCGTAA
ACGTCAACATTTGATTTATGATTCTTCTATTGAAAATGATGGGGAAAAGAGACAAATGTATGAAATCCGACCAGGACATT
TTGTTTATGCTACAGAAGCAGAGGCTAAAAATTATAAAGAAGAAGCCAATGTAAATTAG

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-265)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.754	97.756	0.535
amiF	Streptococcus thermophilus LMG 18311	54.426	97.756	0.532
amiF	Streptococcus salivarius strain HSISS4	54.098	97.756	0.529