Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   BSR19_RS04955 Genome accession   NZ_CP018187
Coordinates   988847..989659 (+) Length   270 a.a.
NCBI ID   WP_013990680.1    Uniprot ID   A0AAX1YAX4
Organism   Streptococcus salivarius strain ICDC2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 983847..994659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR19_RS04930 (BSR19_05000) - 984190..984888 (-) 699 WP_002886251.1 amino acid ABC transporter permease -
  BSR19_RS04935 (BSR19_05005) - 984906..985739 (-) 834 WP_080611395.1 transporter substrate-binding domain-containing protein -
  BSR19_RS04940 (BSR19_05010) - 985749..986516 (-) 768 WP_038675884.1 amino acid ABC transporter ATP-binding protein -
  BSR19_RS04945 (BSR19_05015) vicR 986801..987508 (+) 708 WP_002884978.1 response regulator YycF Regulator
  BSR19_RS04950 (BSR19_05020) vicK 987501..988841 (+) 1341 WP_002885062.1 cell wall metabolism sensor histidine kinase VicK Regulator
  BSR19_RS04955 (BSR19_05025) vicX 988847..989659 (+) 813 WP_013990680.1 MBL fold metallo-hydrolase Regulator
  BSR19_RS04960 (BSR19_05030) - 989719..990078 (+) 360 WP_156246673.1 YbaN family protein -
  BSR19_RS04965 (BSR19_05035) - 990130..991344 (-) 1215 WP_156246674.1 aminoacyltransferase -
  BSR19_RS04970 (BSR19_05040) yidA 991346..992155 (-) 810 WP_002890845.1 sugar-phosphatase -
  BSR19_RS04975 (BSR19_05045) - 992334..993191 (+) 858 WP_156246675.1 GNAT family N-acetyltransferase -
  BSR19_RS04980 (BSR19_05050) - 993283..993669 (+) 387 WP_156246676.1 DUF1934 domain-containing protein -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30108.96 Da        Isoelectric Point: 5.3499

>NTDB_id=206850 BSR19_RS04955 WP_013990680.1 988847..989659(+) (vicX) [Streptococcus salivarius strain ICDC2]
MTSDLGFKYSILASGSTGNSFYLETPEKKILVDAGLSGKKITSLLAEIDRDPSDLDAILVTHEHKDHIHGVGVLARKYGM
DIYANEKTWQIMDSKNMLGKIDNSQKHVFSRDKLLTFGDIDIESFGVSHDAIDPQFYRFMKDGKSFVMLTDTGYVSDRMA
GIIENADGYLIESNHDVEILRAGSYPWSTKQRILSDQGHLCNEDGADAMIRTIGNKTKKIYLGHLSKENNIKELAHMTME
NQLARADFGVGTDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=206850 BSR19_RS04955 WP_013990680.1 988847..989659(+) (vicX) [Streptococcus salivarius strain ICDC2]
ATGACCTCAGATTTAGGGTTTAAATATAGTATTTTGGCTTCAGGGTCAACTGGTAATTCCTTTTATTTGGAAACTCCAGA
GAAGAAGATTCTTGTAGATGCTGGTTTGTCTGGTAAGAAAATCACAAGTTTGCTAGCTGAGATTGATCGTGATCCGAGCG
ATTTGGATGCTATCTTAGTTACGCATGAACACAAGGATCACATCCATGGTGTAGGCGTTTTAGCTCGTAAATATGGCATG
GATATCTACGCCAACGAGAAAACCTGGCAGATTATGGATAGTAAAAATATGCTTGGCAAGATTGATAATAGCCAGAAACA
TGTTTTTTCTCGTGATAAGCTTCTGACCTTTGGAGACATTGATATTGAGTCTTTTGGAGTTAGTCACGATGCTATTGATC
CACAGTTCTATCGCTTTATGAAAGATGGAAAGAGTTTTGTCATGTTGACGGATACGGGTTATGTTTCTGATCGTATGGCA
GGTATTATTGAAAATGCCGATGGCTATCTGATTGAGTCCAATCATGATGTTGAAATCCTTAGAGCAGGTTCATATCCTTG
GTCAACTAAGCAACGTATCCTCTCTGATCAAGGTCACTTATGTAATGAAGATGGAGCGGATGCTATGATTCGTACCATAG
GTAACAAAACTAAAAAGATCTACTTGGGTCACCTTTCTAAAGAAAATAATATCAAGGAGTTGGCCCACATGACGATGGAA
AATCAGCTGGCACGTGCTGACTTTGGTGTTGGAACTGACTTCAAGGTTTATGATACCTCACCAGACACAGCGACACCACT
GACAGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-214)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.239

99.259

0.767

Multiple sequence alignment