Detailed information NTG0206732

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: BSR08_RS16160
• Genome accession: NZ_CP018184
• Coordinates: 2994868..2996013 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain KH2
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2989868..3001013

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSR08_RS16135 (BSR08_16355)	albF	2989884..2991164 (+)	1281	WP_014481221.1	pitrilysin family protein	-
BSR08_RS16140 (BSR08_16360)	albG	2991161..2991862 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
BSR08_RS16145 (BSR08_16365)	ywhL	2991868..2993244 (-)	1377	WP_014481223.1	YncE family protein	-
BSR08_RS16150 (BSR08_16370)	ywhK	2993283..2994638 (-)	1356	WP_014481224.1	YncE family protein	-
BSR08_RS23720 (BSR08_16375)	-	2994635..2994865 (-)	231	Protein_3190	hypothetical protein	-
BSR08_RS16160 (BSR08_16380)	rapF	2994868..2996013 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
BSR08_RS16165 (BSR08_16385)	phrF	2995997..2996116 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
BSR08_RS16170 (BSR08_16390)	-	2996214..2996641 (+)	428	Protein_3193	YbaK/EbsC family protein	-
BSR08_RS16175 (BSR08_16395)	speB	2996706..2997578 (-)	873	WP_003227545.1	agmatinase	-
BSR08_RS16180 (BSR08_16400)	speE	2997639..2998469 (-)	831	WP_003227543.1	spermidine synthase	-
BSR08_RS16185 (BSR08_16405)	pbpG	2998671..3000746 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=206732 BSR08_RS16160 WP_014481226.1 2994868..2996013(+) (rapF) [Bacillus subtilis strain KH2]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=206732 BSR08_RS16160 WP_014481226.1 2994868..2996013(+) (rapF) [Bacillus subtilis strain KH2]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572