Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   BSR08_RS16165 Genome accession   NZ_CP018184
Coordinates   2995997..2996116 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis strain KH2     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 2990997..3001116
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BSR08_RS16140 (BSR08_16360) albG 2991161..2991862 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  BSR08_RS16145 (BSR08_16365) ywhL 2991868..2993244 (-) 1377 WP_014481223.1 YncE family protein -
  BSR08_RS16150 (BSR08_16370) ywhK 2993283..2994638 (-) 1356 WP_014481224.1 YncE family protein -
  BSR08_RS23720 (BSR08_16375) - 2994635..2994865 (-) 231 Protein_3190 hypothetical protein -
  BSR08_RS16160 (BSR08_16380) rapF 2994868..2996013 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  BSR08_RS16165 (BSR08_16385) phrF 2995997..2996116 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  BSR08_RS16170 (BSR08_16390) - 2996214..2996641 (+) 428 Protein_3193 YbaK/EbsC family protein -
  BSR08_RS16175 (BSR08_16395) speB 2996706..2997578 (-) 873 WP_003227545.1 agmatinase -
  BSR08_RS16180 (BSR08_16400) speE 2997639..2998469 (-) 831 WP_003227543.1 spermidine synthase -
  BSR08_RS16185 (BSR08_16405) pbpG 2998671..3000746 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=206733 BSR08_RS16165 WP_009968329.1 2995997..2996116(+) (phrF) [Bacillus subtilis strain KH2]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=206733 BSR08_RS16165 WP_009968329.1 2995997..2996116(+) (phrF) [Bacillus subtilis strain KH2]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment