Detailed information NTG0020654

Bioinformatically predicted

Overview

• Name: xerS
• Type: Machinery gene
• Locus tag: SMA_1010
• Genome accession: HE613569
• Coordinates: 992678..993748 (+)
• Length: 356 a.a.
• NCBI ID: CCF02301.1
• Uniprot ID: -
• Organism: Streptococcus macedonicus ACA-DC 198
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 987678..998748

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMA_1003	-	987801..988058 (-)	258	CCF02294.1	YoeB toxin protein	-
SMA_1004	-	988051..988233 (-)	183	CCF02295.1	YefM protein (antitoxin to YoeB)	-
SMA_1005	-	988335..988667 (+)	333	CCF02296.1	Signal recognition particle associated protein	-
SMA_1006	ffh	988738..990303 (+)	1566	CCF02297.1	Signal recognition particle, subunit Ffh SRP54	-
SMA_1007	-	990859..991557 (+)	699	CCF02298.1	Hypothetical protein	-
SMA_1008	-	991545..991775 (+)	231	CCF02299.1	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	-
SMA_1009	-	991882..992400 (+)	519	CCF02300.1	Duplicated ATPase component BL0693 of energizing module of predicted ECF transporter	-
SMA_1010	xerS	992678..993748 (+)	1071	CCF02301.1	Tyrosine recombinase XerC	Machinery gene
SMA_1011	-	993856..994536 (-)	681	CCF02302.1	Pleiotropic regulator of exopolysaccharide synthesis, competence and biofilm formation Ftr, XRE family	-
SMA_1012	-	994619..995566 (-)	948	CCF02303.1	Two-component system histidine kinase	-
SMA_1013	braR	995563..996261 (-)	699	CCF02304.1	Two-component response regulator YvcP	Regulator
SMA_1014	-	996313..998292 (-)	1980	CCF02305.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 41338.40 Da
• Isoelectric Point: 9.4174

>NTDB_id=20654 SMA_1010 CCF02301.1 992678..993748(+) (xerS) [Streptococcus macedonicus ACA-DC 198]
MKREKLLEKIDELKEIMPWYVLDYYQSKLSVPYSFTTLYEYLKEYRRFFEWLLDSGISDVTKIADVELTTLEHLSKKDME
SFILYLRERPSLNTYSTKQGVSQTTINRTLSALSSLFKYLTEEVEDENGEPYFYRNVMKKIATKKKKETLAARAENIKGK
LFLGDETMAFIDYIDTEYQNKLSHRALSSFQKNKERDLALIALLLASGVRLSEAVDLDLKDLNLNMMVIEITRKGGKRDS
VNVANFAKPYLEAYLQIRASRYKAEKQDQALFLTEYRGVPNRIDASSVEKLVAKYSQDFKVRVTPHKLRHTLATRLYNAT
KSQVLVSHQLGHASTQVTDLYTHIVNDEQKNALDKL

Nucleotide

• Length: 1071 bp

>NTDB_id=20654 SMA_1010 CCF02301.1 992678..993748(+) (xerS) [Streptococcus macedonicus ACA-DC 198]
ATGAAACGTGAAAAATTACTTGAAAAAATTGATGAACTTAAAGAAATAATGCCATGGTACGTCTTGGACTATTACCAATC
AAAACTTTCAGTTCCTTATAGCTTCACAACTTTATATGAATACCTAAAAGAATATCGCCGATTTTTCGAATGGCTTTTGG
ATTCTGGCATTTCAGATGTTACTAAAATTGCTGACGTTGAGTTAACAACCCTGGAACATCTTTCTAAAAAAGACATGGAA
TCATTCATCCTTTATCTGCGTGAACGTCCCTCTTTGAACACTTATTCAACAAAACAAGGTGTCTCACAAACAACGATTAA
TCGGACGTTATCAGCACTTTCAAGCCTGTTTAAATACCTAACAGAAGAGGTTGAAGATGAAAATGGTGAGCCCTACTTCT
ATCGAAATGTCATGAAAAAAATCGCTACTAAGAAGAAAAAAGAAACGCTGGCAGCTCGAGCTGAAAATATAAAAGGCAAA
CTTTTCCTAGGTGACGAGACCATGGCATTTATCGACTATATCGATACAGAGTATCAAAATAAGCTCTCTCACCGCGCCCT
CTCCTCCTTCCAAAAGAATAAGGAGCGTGATTTAGCGCTTATTGCTCTTCTGCTTGCCTCTGGTGTCCGTCTTTCAGAAG
CTGTTGATCTTGATTTGAAAGACTTAAACCTTAACATGATGGTTATCGAAATCACTCGTAAAGGTGGAAAACGTGATTCT
GTCAATGTTGCTAACTTTGCTAAGCCTTATTTAGAAGCTTATTTGCAAATCAGAGCGTCTCGCTATAAGGCAGAAAAACA
AGACCAAGCTCTCTTTTTAACAGAATATCGCGGTGTTCCTAACCGTATTGATGCTTCAAGCGTTGAAAAGTTAGTTGCTA
AATACTCTCAAGATTTCAAAGTTCGTGTAACACCCCACAAACTGCGCCACACACTTGCAACACGTCTTTACAATGCTACT
AAATCACAAGTCCTAGTTAGCCACCAATTAGGACATGCCAGCACACAAGTTACCGATTTATACACCCATATTGTCAACGA
CGAACAAAAAAATGCCTTAGATAAGCTTTAA

Domains

Predicted by InterProScan.

• Phage integrase family (Phage_integrase) (191-344)

• Phage integrase, N-terminal SAM-like domain (Phage_int_SAM_4) (33-122)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xerS	Streptococcus pneumoniae R6	82.584	100	0.826