Detailed information NTG0206525

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: BSF20_RS09705
• Genome accession: NZ_CP018152
• Coordinates: 1861177..1862340 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain LM2303
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 1856177..1867340

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BSF20_RS09685 (BSF20_09480)	tuaH	1856594..1857790 (+)	1197	WP_044052856.1	teichuronic acid biosynthesis protein TuaH	-
BSF20_RS09690 (BSF20_09485)	-	1857923..1858999 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
BSF20_RS09695 (BSF20_09490)	-	1859089..1860303 (-)	1215	WP_003151383.1	LCP family protein	-
BSF20_RS09700 (BSF20_09495)	-	1860308..1860955 (-)	648	WP_003151384.1	YigZ family protein	-
BSF20_RS09705 (BSF20_09500)	degS	1861177..1862340 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
BSF20_RS09710 (BSF20_09505)	degU	1862417..1863106 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
BSF20_RS09715 (BSF20_09510)	-	1863204..1864052 (+)	849	WP_044052857.1	DegV family protein	-
BSF20_RS09720 (BSF20_09515)	comFA	1864160..1865545 (+)	1386	WP_044052858.1	DEAD/DEAH box helicase	Machinery gene
BSF20_RS09725 (BSF20_09520)	-	1865603..1865887 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
BSF20_RS09730 (BSF20_09525)	comFC	1865893..1866582 (+)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
BSF20_RS09735 (BSF20_09530)	-	1866656..1867075 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=206525 BSF20_RS09705 WP_003151385.1 1861177..1862340(+) (degS) [Bacillus amyloliquefaciens strain LM2303]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=206525 BSF20_RS09705 WP_003151385.1 1861177..1862340(+) (degS) [Bacillus amyloliquefaciens strain LM2303]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948