Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | BKJ37_RS10455 | Genome accession | NZ_CP018143 |
| Coordinates | 2174034..2174414 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain HRAB-85 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2169034..2179414
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BKJ37_RS10425 (BKJ37_10285) | tadA | 2169152..2169655 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| BKJ37_RS10430 (BKJ37_10290) | - | 2169662..2170786 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| BKJ37_RS10435 (BKJ37_10295) | ung | 2170783..2171496 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| BKJ37_RS10440 (BKJ37_10300) | - | 2171547..2172143 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| BKJ37_RS10445 (BKJ37_10305) | gspK | 2172374..2173333 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| BKJ37_RS10450 (BKJ37_10310) | xcpW | 2173333..2174034 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| BKJ37_RS10455 (BKJ37_10315) | xcpV | 2174034..2174414 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| BKJ37_RS10460 (BKJ37_10320) | - | 2174404..2174958 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| BKJ37_RS10465 (BKJ37_10325) | - | 2174968..2175576 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| BKJ37_RS10470 (BKJ37_10330) | - | 2175614..2176387 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| BKJ37_RS10475 (BKJ37_10335) | - | 2176405..2176746 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| BKJ37_RS10480 (BKJ37_10340) | - | 2176758..2177738 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| BKJ37_RS10485 (BKJ37_10345) | kdsB | 2177750..2178511 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=206327 BKJ37_RS10455 WP_000836911.1 2174034..2174414(-) (xcpV) [Acinetobacter baumannii strain HRAB-85]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=206327 BKJ37_RS10455 WP_000836911.1 2174034..2174414(-) (xcpV) [Acinetobacter baumannii strain HRAB-85]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |