Detailed information NTG0206326

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: BKJ37_RS10450
• Genome accession: NZ_CP018143
• Coordinates: 2173333..2174034 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain HRAB-85
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2168333..2179034

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BKJ37_RS10420 (BKJ37_10280)	-	2168639..2169082 (-)	444	WP_001246675.1	SRPBCC family protein	-
BKJ37_RS10425 (BKJ37_10285)	tadA	2169152..2169655 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
BKJ37_RS10430 (BKJ37_10290)	-	2169662..2170786 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
BKJ37_RS10435 (BKJ37_10295)	ung	2170783..2171496 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
BKJ37_RS10440 (BKJ37_10300)	-	2171547..2172143 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
BKJ37_RS10445 (BKJ37_10305)	gspK	2172374..2173333 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
BKJ37_RS10450 (BKJ37_10310)	xcpW	2173333..2174034 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
BKJ37_RS10455 (BKJ37_10315)	xcpV	2174034..2174414 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
BKJ37_RS10460 (BKJ37_10320)	-	2174404..2174958 (-)	555	WP_000841373.1	type II secretion system protein	-
BKJ37_RS10465 (BKJ37_10325)	-	2174968..2175576 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
BKJ37_RS10470 (BKJ37_10330)	-	2175614..2176387 (-)	774	WP_000497298.1	TatD family hydrolase	-
BKJ37_RS10475 (BKJ37_10335)	-	2176405..2176746 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
BKJ37_RS10480 (BKJ37_10340)	-	2176758..2177738 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
BKJ37_RS10485 (BKJ37_10345)	kdsB	2177750..2178511 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=206326 BKJ37_RS10450 WP_000594589.1 2173333..2174034(-) (xcpW) [Acinetobacter baumannii strain HRAB-85]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=206326 BKJ37_RS10450 WP_000594589.1 2173333..2174034(-) (xcpW) [Acinetobacter baumannii strain HRAB-85]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996