Detailed information
Bioinformatically predicted
Overview
| Name | comGE/cglE | Type | Machinery gene |
| Locus tag | SMA_0096 | Genome accession | HE613569 |
| Coordinates | 104289..104531 (+) | Length | 80 a.a. |
| NCBI ID | CCF01387.1 | Uniprot ID | - |
| Organism | Streptococcus macedonicus ACA-DC 198 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 99289..109531
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMA_0091 | - | 101229..101558 (+) | 330 | CCF01382.1 | DNA binding protein | - |
| SMA_0092 | comGA | 101668..102609 (+) | 942 | CCF01383.1 | Late competence protein ComGA, access of DNA to ComEA | Machinery gene |
| SMA_0093 | comGB | 102491..103576 (+) | 1086 | CCF01384.1 | Late competence protein ComGB, access of DNA to ComEA | Machinery gene |
| SMA_0094 | comGC | 103576..103869 (+) | 294 | CCF01385.1 | Late competence protein ComGC, access of DNA to ComEA | Machinery gene |
| SMA_0095 | comGD | 103853..104284 (+) | 432 | CCF01386.1 | Late competence protein ComGD, access of DNA to ComEA | Machinery gene |
| SMA_0096 | comGE/cglE | 104289..104531 (+) | 243 | CCF01387.1 | Late competence protein ComGE | Machinery gene |
| SMA_0097 | comGF | 104485..104952 (+) | 468 | CCF01388.1 | Late competence protein ComGF, access of DNA to ComEA | Machinery gene |
| SMA_0098 | comGG | 104924..105229 (+) | 306 | CCF01389.1 | Late competence protein ComGG | Machinery gene |
| SMA_0099 | comGH | 105311..106267 (+) | 957 | CCF01390.1 | Adenine-specific methyltransferase | Machinery gene |
| SMA_0100 | ackA | 106320..107519 (+) | 1200 | CCF01391.1 | Acetate kinase | - |
| SMA_0101 | - | 107681..107881 (+) | 201 | CCF01392.1 | Transcriptional regulator, Cro/CI family | - |
| SMA_0102 | - | 107891..108100 (+) | 210 | CCF01393.1 | Hypothetical protein | - |
| SMA_0103 | - | 108113..108565 (+) | 453 | CCF01394.1 | Hypothetical protein | - |
| SMA_0104 | - | 108577..109212 (+) | 636 | CCF01395.1 | Membrane-bound protease, CAAX family | - |
Sequence
Protein
Download Length: 80 a.a. Molecular weight: 8872.30 Da Isoelectric Point: 5.0362
>NTDB_id=20606 SMA_0096 CCF01387.1 104289..104531(+) (comGE/cglE) [Streptococcus macedonicus ACA-DC 198]
MIALGLLAMITSVVLGEIDKNSQSMQESLRQQEALNVATMAVQTGQNHLKMNGVEVEIIKKDGEIYVYEGKTEILHVKKD
MIALGLLAMITSVVLGEIDKNSQSMQESLRQQEALNVATMAVQTGQNHLKMNGVEVEIIKKDGEIYVYEGKTEILHVKKD
Nucleotide
Download Length: 243 bp
>NTDB_id=20606 SMA_0096 CCF01387.1 104289..104531(+) (comGE/cglE) [Streptococcus macedonicus ACA-DC 198]
TTGATAGCACTAGGATTGTTAGCGATGATTACGAGTGTTGTTTTAGGGGAAATTGATAAAAATAGCCAGTCTATGCAAGA
AAGTTTACGGCAGCAGGAAGCTCTTAATGTGGCAACAATGGCTGTGCAAACAGGACAAAATCATTTGAAGATGAATGGTG
TTGAGGTTGAGATTATCAAAAAAGATGGAGAGATCTATGTTTATGAGGGGAAAACGGAAATATTACACGTTAAAAAAGAC
TAG
TTGATAGCACTAGGATTGTTAGCGATGATTACGAGTGTTGTTTTAGGGGAAATTGATAAAAATAGCCAGTCTATGCAAGA
AAGTTTACGGCAGCAGGAAGCTCTTAATGTGGCAACAATGGCTGTGCAAACAGGACAAAATCATTTGAAGATGAATGGTG
TTGAGGTTGAGATTATCAAAAAAGATGGAGAGATCTATGTTTATGAGGGGAAAACGGAAATATTACACGTTAAAAAAGAC
TAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGE/cglE | Streptococcus mitis SK321 |
40 |
100 |
0.4 |
| comGE | Streptococcus mutans UA140 |
39.241 |
98.75 |
0.388 |
| comGE | Streptococcus mutans UA159 |
39.241 |
98.75 |
0.388 |
| comGE/cglE | Streptococcus pneumoniae R6 |
38.75 |
100 |
0.388 |
| comGE/cglE | Streptococcus pneumoniae TIGR4 |
38.75 |
100 |
0.388 |
| comGE/cglE | Streptococcus mitis NCTC 12261 |
38.75 |
100 |
0.388 |
| comGE/cglE | Streptococcus pneumoniae Rx1 |
38.75 |
100 |
0.388 |
| comGE/cglE | Streptococcus pneumoniae D39 |
38.75 |
100 |
0.388 |