Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   BRL64_RS14980 Genome accession   NZ_CP018100
Coordinates   2856109..2858400 (-) Length   763 a.a.
NCBI ID   WP_065215229.1    Uniprot ID   -
Organism   Bacillus safensis strain BRM1     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2851109..2863400
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BRL64_RS14940 (BRL64_14685) - 2851513..2851944 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  BRL64_RS14945 (BRL64_14690) - 2851944..2852285 (+) 342 WP_024423316.1 Na(+)/H(+) antiporter subunit C -
  BRL64_RS14950 (BRL64_14695) - 2852278..2853756 (+) 1479 WP_081124743.1 Na+/H+ antiporter subunit D -
  BRL64_RS14955 (BRL64_14700) - 2853763..2854242 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  BRL64_RS14960 (BRL64_14705) - 2854242..2854523 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  BRL64_RS14965 (BRL64_14710) mnhG 2854507..2854881 (+) 375 WP_024423320.1 monovalent cation/H(+) antiporter subunit G -
  BRL64_RS14970 (BRL64_14715) - 2854974..2855363 (-) 390 WP_024423321.1 hotdog fold thioesterase -
  BRL64_RS14975 (BRL64_14720) comA 2855387..2856028 (-) 642 WP_034282566.1 response regulator transcription factor Regulator
  BRL64_RS14980 (BRL64_14725) comP 2856109..2858400 (-) 2292 WP_065215229.1 ATP-binding protein Regulator
  BRL64_RS14985 (BRL64_14730) comX 2858414..2858587 (-) 174 WP_046313343.1 competence pheromone ComX -
  BRL64_RS14990 (BRL64_14735) - 2858565..2859488 (-) 924 WP_065215228.1 polyprenyl synthetase family protein -
  BRL64_RS14995 (BRL64_14740) degQ 2859641..2859781 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  BRL64_RS15000 (BRL64_14745) - 2860287..2860643 (+) 357 WP_041115816.1 hypothetical protein -
  BRL64_RS15005 (BRL64_14750) - 2860679..2861905 (-) 1227 WP_024423326.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 88031.41 Da        Isoelectric Point: 7.0526

>NTDB_id=205782 BRL64_RS14980 WP_065215229.1 2856109..2858400(-) (comP) [Bacillus safensis strain BRM1]
MQKFYSKLTVILMILSFIYVIYISYINVFNIFVGAVVSVNSDGQLEIVDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIEIENVSLLSQENLFIYIIPIIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISSFVVIFTMTSVPSLYMHFMYQYLKELGTVIISWRVLLCLYAVPFINIVLEILFKNMVLAAFNLLSFFA
LAFITIIITLRAAKKLKGTEIGNVLSAFALILISSFSPFMLFFIIPYLFHKYFISPYILASFALLIPFFLVYQFMTNKLY
NVDFFLGRIKYYSLLAITPTIVVVVIFDFIQKPSANFYTMKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIREASSLHQVLYHLKYTILEVLVVNKAFVLEVKADGQVEEIDESTEDSKLWKKYVDQFQELLDEVGKIIALDKGF
MMKIGERGGHSFVICCLSNLRTPKLSRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKIMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSKATQVLVMLICIKDQVVLHYEDDGVGFDAS
HLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=205782 BRL64_RS14980 WP_065215229.1 2856109..2858400(-) (comP) [Bacillus safensis strain BRM1]
ATGCAAAAATTTTACTCGAAATTAACTGTTATATTAATGATCCTTAGCTTTATTTATGTGATTTATATTTCCTACATTAA
TGTGTTTAATATTTTTGTAGGAGCAGTCGTTTCGGTGAATAGTGACGGCCAACTTGAAATAGTGGATGTTGTTGATTTTA
CAGACAGCTATTATGCTGGTGTTAGGAAAGGCGATATCATCCTTGAAGTGAACGGTAACAAAGAACCAACCGAAGAAGTA
AGACGAGGTTATTTAGCGAATGTCAAGAGTTTAGTTGTTGATAGACATGGTGATGAAATTGAAATAGAGAATGTAAGCTT
ATTGAGTCAAGAAAATCTGTTTATTTATATAATACCTATCATTTTTTATTCGATCTGTCTATTTTGTATATTTATGATTT
TAAAAATCAATAAATCTAGGAAAAAAGAGTCTGCATATATTCTAGCTCTCTTTTTGCTAGCTGTTGCTGTAGCCTATGTA
AGCTCTGGGGGCTCTGGTAAAGGGGAATATATTAGCAGCTTTGTCGTAATTTTTACGATGACTAGTGTACCGTCGTTATA
TATGCACTTTATGTATCAATATTTAAAGGAATTAGGAACGGTAATTATTAGTTGGCGTGTACTTCTTTGTTTGTATGCCG
TCCCTTTTATAAATATTGTATTAGAAATTCTGTTTAAAAATATGGTTTTAGCTGCTTTTAACTTACTATCATTCTTTGCA
CTTGCATTTATTACGATTATTATCACATTAAGGGCTGCTAAAAAGTTGAAAGGGACTGAAATCGGAAATGTCCTTAGTGC
CTTTGCACTTATTTTGATCTCATCATTCAGTCCATTTATGCTATTTTTTATTATTCCTTATTTATTTCATAAATATTTTA
TTTCACCTTATATCCTAGCATCGTTCGCTTTATTGATTCCGTTTTTCTTAGTCTATCAATTTATGACAAATAAATTATAT
AATGTTGATTTCTTTTTAGGGAGAATCAAATATTATAGTCTTTTAGCCATCACACCTACTATAGTGGTAGTCGTTATATT
TGATTTCATTCAAAAGCCAAGTGCTAACTTTTATACAATGAAATTTACGATTATCACGTATATTCTTATGCTCACTGTCT
TCTATTTTAAAGAAATCATCGACTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCATAATTACCAAGATAGCGTGTTT
AAATTCACGCAGCTCATTCGTGAGGCGTCATCACTTCACCAAGTGTTATATCATTTAAAATACACCATTTTAGAAGTACT
TGTTGTAAATAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAGGTTGAAGAGATTGATGAATCGACAGAGGACAGTA
AGCTATGGAAAAAGTATGTAGACCAATTTCAAGAATTATTAGATGAAGTCGGGAAAATCATTGCGCTTGATAAAGGGTTT
ATGATGAAAATTGGTGAGCGGGGCGGTCACTCGTTTGTGATTTGCTGTTTATCTAATTTACGGACACCGAAATTGTCGCG
CGATGAGATTTCTTGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATGTCGTCAAGATCGAAGAATTGA
TGGAGCACCTTGACGATTTGAAGCAGCGTGAGGCCAATCCTGCATGGCTGAAGAAAATCATGTTTGCTATGGAAGAAAAG
CAGCGTTCAGATTTAGCGAGAGATCTTCATGATTCCGTGCTGCAGGACTTGATATCACTAAAAAGGCAGTCGGAGATGTT
TTTAACGAATTTCCAAAACAACCAGTGCCCGACATCTATTGAAAATTCGCTTATCTCATGGAATGATCAAATGTCCAAAG
TGATTCAAACGACGAGAGAAACGTGTCATGAGCTTCGGCCGCAGCTGCTGTATGATTTAGGTTTAGTAAAGGCGATATCG
AAGCTGACTTCTCAAATCCAGGAGGAAGCACCGTTTCATATTAGGCTGAATACGACACGCTTTGATAAAGAATTGGACAT
TGATATTGATTCACAGCTGAATATTTACAGAATTGTTCAGGAGCTGTTATCCAACGCCCTGAAGCACTCAAAAGCCACTC
AAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGATGGAGTCGGTTTTGATGCCAGT
CATCTTGATCAGCACACAATGAGCATGGGTCTGTCGGGAATTAGAGAAAGAGTGAAAGCGTTAAATGGAAAGCTTCAAAT
TCACACAGCCCCGGAAAAAGGGCTCAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

48.972

100

0.499


Multiple sequence alignment