Detailed information NTG0020504

Bioinformatically predicted

Overview

• Name: luxO
• Type: Regulator
• Locus tag: PSJM300_18040
• Genome accession: CP003725
• Coordinates: 3905248..3906594 (+)
• Length: 448 a.a.
• NCBI ID: AFN79661.1
• Uniprot ID: -
• Organism: Pseudomonas stutzeri DSM 10701
• Function: promote HapR production (predicted from homology) Competence regulation

Genomic Context

Location: 3900248..3911594

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSJM300_18010	-	3900481..3901326 (+)	846	AFN79655.1	formate dehydrogenase accessory protein FdhD	-
PSJM300_18015	-	3901521..3901961 (+)	441	AFN79656.1	17 kDa surface antigen	-
PSJM300_18020	-	3902182..3903411 (-)	1230	AFN79657.1	hypothetical protein	-
PSJM300_18025	-	3903857..3904027 (-)	171	AFN79658.1	hypothetical protein	-
PSJM300_18030	-	3904121..3904357 (-)	237	AFN79659.1	hypothetical protein	-
PSJM300_18035	-	3904564..3904992 (-)	429	AFN79660.1	hypothetical protein	-
PSJM300_18040	luxO	3905248..3906594 (+)	1347	AFN79661.1	alginate biosynthesis transcriptional regulatory protein AlgB	Regulator
PSJM300_18045	-	3906591..3908378 (+)	1788	AFN79662.1	sensory box histidine kinase	-
PSJM300_18050	-	3908407..3909183 (-)	777	AFN79663.1	N-acetylmuramoyl-L-alanine amidase	-
PSJM300_18055	-	3909277..3911127 (-)	1851	AFN79664.1	diguanylate cyclase	-

Sequence

Protein

• Length: 448 a.a.
• Molecular weight: 49313.39 Da
• Isoelectric Point: 5.3944

>NTDB_id=20504 PSJM300_18040 AFN79661.1 3905248..3906594(+) (luxO) [Pseudomonas stutzeri DSM 10701]
MDQTTDTGGRILLVDDEAAILRTFRYCLEDRGYTVLTAASAAQAEAILQRQVFDLCFLDLRLGEDNGLDVLQQMRVLAPW
MRVVIVTAHSAVDTAVDAMQAGAADYLVKPCSPEQLRLSAAKQLEVRQMAARLEALEGEVQQRNDAIGSHSPAMMGVVET
ARQVADTDANILILGESGTGKGELARAIHNWSRRARKAFITINCPSLSADLMESELFGHNRGAFTGATESTLGRVNQADG
GTLFLDEIGDFPLALQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVREGKFREDLLYRLNVITLNLPPMRE
RPEDVLALAERFLAFFVKSYGRPARGFSDGAIAALKAYRWPGNVRELRNVVERASIICPQPMIEVSHLGLADQAASNAPR
IGEPLSLEALEKAHIAGVLSTSETLEQAARILGIDASTLYRKRKQYGL

Nucleotide

• Length: 1347 bp

>NTDB_id=20504 PSJM300_18040 AFN79661.1 3905248..3906594(+) (luxO) [Pseudomonas stutzeri DSM 10701]
ATGGACCAAACGACCGACACCGGTGGCCGCATCCTTCTGGTGGATGACGAAGCAGCGATCCTGCGCACCTTCCGTTACTG
CCTGGAGGATCGCGGCTACACCGTGTTGACAGCGGCCAGTGCGGCGCAGGCCGAAGCCATCCTGCAACGCCAGGTATTCG
ACCTGTGTTTTCTGGATCTGCGCCTGGGCGAGGACAACGGGCTGGACGTCCTGCAGCAGATGCGTGTGCTGGCGCCCTGG
ATGCGGGTGGTCATCGTCACCGCCCATTCGGCGGTGGATACCGCGGTGGACGCCATGCAGGCCGGCGCGGCGGATTACCT
GGTCAAACCCTGCAGCCCCGAGCAACTGCGCCTGTCGGCAGCCAAACAACTGGAAGTCCGGCAGATGGCCGCCCGCCTCG
AGGCGCTCGAAGGCGAAGTGCAACAGCGCAACGACGCGATCGGCTCGCACAGCCCGGCGATGATGGGCGTGGTGGAGACT
GCCCGGCAGGTCGCCGATACCGATGCCAACATCCTCATCCTCGGCGAATCCGGCACCGGCAAGGGCGAACTGGCGCGCGC
CATTCACAACTGGAGCAGGCGCGCACGCAAGGCCTTCATCACCATCAACTGCCCGTCGCTGTCGGCCGACCTGATGGAGA
GCGAGCTGTTCGGCCACAACCGCGGCGCCTTCACCGGTGCTACCGAAAGCACCCTTGGGCGCGTCAACCAGGCCGACGGC
GGCACCCTGTTCCTCGACGAGATCGGCGACTTCCCGCTGGCGCTGCAACCCAAGCTGCTGCGCTTCATCCAGGACAAGGA
ATACGAGCGCGTGGGCGACCCGGTCACCCGCCGCGCCGATGTGCGCATCCTCGCGGCGACCAACCTCAACCTCGAGGAAA
TGGTGCGCGAGGGCAAGTTCCGCGAAGACCTGCTCTACCGCCTAAACGTCATCACCCTGAACCTGCCGCCCATGCGCGAG
CGTCCCGAGGACGTGCTGGCCCTGGCCGAGCGCTTCCTGGCGTTCTTCGTGAAGAGCTACGGGCGCCCGGCACGCGGCTT
CAGCGACGGAGCGATAGCCGCGCTCAAGGCCTATCGCTGGCCCGGCAACGTCCGCGAGCTGCGCAACGTGGTCGAGCGCG
CCAGCATCATCTGTCCGCAGCCGATGATCGAAGTGAGCCATCTCGGCTTGGCCGACCAGGCGGCCAGCAATGCCCCGCGG
ATCGGCGAACCCCTGAGCCTGGAAGCCCTGGAAAAGGCTCACATTGCCGGTGTGCTGAGCACCAGCGAAACCCTCGAGCA
GGCCGCCCGCATCCTCGGTATCGATGCCTCCACGCTTTACCGCAAGCGCAAGCAATACGGCCTATGA

Domains

Predicted by InterProScan.

• Sigma-54 interaction domain (Sigma54_activat) (149-313)

• Bacterial regulatory protein, Fis family (HTH_8) (406-446)

• Response regulator receiver domain (Response_reg) (11-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
luxO	Vibrio cholerae strain A1552	37.916	100	0.382
pilR	Pseudomonas aeruginosa PAK	42.298	85.491	0.362