Detailed information NTG0020504

Bioinformatically predicted

Overview

• Name: comEC/comE3
• Type: Machinery gene
• Locus tag: JHP_RS06685
• Genome accession: NC_000921
• Coordinates: 1398329..1399642 (-)
• Length: 437 a.a.
• NCBI ID: WP_000653637.1
• Uniprot ID: -
• Organism: Helicobacter pylori J99
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1393329..1404642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JHP_RS06655 (jhp1273)	nadC	1393792..1394613 (-)	822	WP_000404063.1	carboxylating nicotinate-nucleotide diphosphorylase	-
JHP_RS06660 (jhp1274)	nadA	1394613..1395623 (-)	1011	WP_001141872.1	quinolinate synthase NadA	-
JHP_RS06665 (jhp1275)	-	1395613..1396416 (-)	804	WP_000226231.1	phosphatidylserine decarboxylase	-
JHP_RS06670 (jhp1276)	-	1396410..1396916 (-)	507	WP_000953123.1	DUF6115 domain-containing protein	-
JHP_RS06675 (jhp1277)	-	1396929..1397423 (-)	495	WP_046656151.1	hypothetical protein	-
JHP_RS06680 (jhp1278)	mqnP	1397416..1398258 (-)	843	WP_230078047.1	menaquinone biosynthesis prenyltransferase MqnP	-
JHP_RS06685 (jhp1279)	comEC/comE3	1398329..1399642 (-)	1314	WP_000653637.1	ComEC/Rec2 family competence protein	Machinery gene
JHP_RS06690 (jhp1280)	-	1399639..1401099 (-)	1461	WP_000349702.1	replicative DNA helicase	-
JHP_RS06695 (jhp1281)	-	1401110..1402504 (-)	1395	WP_000953985.1	NAD(P)H-hydrate dehydratase	-
JHP_RS06700 (jhp1282)	crdS	1402507..1403709 (-)	1203	WP_079993037.1	copper-sensing histidine kinase CrdS	-
JHP_RS06705 (jhp1283)	crdR	1403675..1404316 (-)	642	WP_001169735.1	copper response regulator transcription factor CrdR	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 50204.10 Da
• Isoelectric Point: 9.8459

>NTDB_id=20504 JHP_RS06685 WP_000653637.1 1398329..1399642(-) (comEC/comE3) [Helicobacter pylori J99]
MKDKTFQGAFELLTTPKEYSWCGVVLSLLLAINLYLEYLNHQKLDFSKPTSLNAQILLQYPKTKDQKTYFVLKLQSKGMI
FYTTIKEPLKNLQYRYAQFFGKIKPCSFLESLKSCFFQTYSFSLTRKQDFKSHLRHFIDSAHSNALVGNLYRALFIGDSL
NKDLRDRANALGINHLLAISGFHLGILSASVYFLFSLFYTPLQKRYFPYRNAFYDIGVLVWVFLLGYLLLLDFLPSFFRA
FLMGLLGFLACFFGVRILSFKLLVLACCIAIALLPKLLFSVGFLLSVCGVWYIFLFLKHTQIFFKDSSFFKRSFQAIALS
VLVFLNMLIVAHAFFPMFSPYQLFSIPLGLIFIVFFPLSLFLHAVGLGSLLDNILSMPLTIPTISVSSPLWLLGAHLFLT
ILSVRFFKVYLSMNVLSMGFFLYCCYQYIIMPSLIVG

Nucleotide

• Length: 1314 bp

>NTDB_id=20504 JHP_RS06685 WP_000653637.1 1398329..1399642(-) (comEC/comE3) [Helicobacter pylori J99]
TTGAAAGATAAAACCTTTCAGGGGGCGTTTGAACTTCTTACGACCCCCAAAGAATACTCATGGTGTGGGGTTGTTTTAAG
CCTTTTGTTGGCGATTAACCTTTATTTAGAATACTTGAATCACCAAAAGCTTGATTTTTCAAAACCTACAAGCTTGAACG
CTCAAATCTTATTACAATACCCTAAAACGAAAGATCAAAAAACCTATTTTGTCTTAAAACTCCAATCTAAGGGCATGATC
TTTTACACCACCATTAAAGAGCCTTTAAAAAACCTCCAATACCGCTATGCGCAATTTTTTGGCAAGATCAAGCCTTGTTC
GTTCTTAGAGTCTCTAAAATCATGCTTTTTTCAAACCTATTCTTTTTCTTTAACGCGAAAACAAGATTTCAAATCGCATT
TGCGCCATTTCATTGACAGCGCCCATTCCAACGCCTTAGTGGGTAATTTGTATCGAGCGTTATTCATAGGGGATAGCTTG
AATAAAGACTTAAGAGACAGGGCTAACGCGCTAGGGATCAACCACTTACTGGCCATTAGCGGGTTTCATTTAGGGATTTT
GAGCGCGAGCGTGTATTTTCTTTTCTCTCTTTTTTATACCCCCTTACAAAAACGCTATTTCCCTTACAGGAACGCTTTTT
ATGATATAGGGGTTTTGGTGTGGGTTTTTTTGCTGGGGTATTTATTGCTATTAGATTTTTTACCCTCTTTTTTCAGGGCG
TTTTTAATGGGCTTATTAGGGTTTTTGGCATGCTTTTTTGGGGTAAGGATTTTGAGTTTTAAACTTTTGGTTTTAGCGTG
CTGTATCGCCATAGCGTTACTCCCTAAATTGCTTTTTAGCGTGGGGTTTTTGCTTTCTGTTTGTGGGGTGTGGTATATCT
TTTTGTTTTTAAAACACACTCAAATTTTTTTTAAAGATTCTTCTTTTTTCAAGCGATCGTTTCAAGCGATCGCTTTAAGC
GTGTTAGTGTTTTTGAACATGCTCATTGTTGCGCATGCCTTTTTCCCTATGTTTTCGCCCTACCAGCTCTTTAGCATTCC
TTTAGGCTTGATTTTTATCGTGTTTTTCCCTTTGAGCTTGTTCTTGCATGCGGTGGGTTTAGGGTCTTTATTGGATAATA
TTCTAAGCATGCCTTTAACCATCCCCACGATTTCGGTTTCTTCGCCTTTATGGCTTTTGGGGGCGCATTTGTTTTTAACG
ATTTTAAGCGTGCGTTTTTTTAAGGTTTATTTAAGCATGAATGTTTTGAGCATGGGCTTTTTCTTGTATTGTTGCTATCA
ATATATTATAATGCCTAGTTTAATTGTGGGTTAG

Domains

Predicted by InterproScan.

• Competence protein (Competence) (159-416)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/comE3	Helicobacter pylori 26695	94.05	100	0.941