Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PSJM300_01660 Genome accession   CP003725
Coordinates   354302..354709 (+) Length   135 a.a.
NCBI ID   AFN76412.1    Uniprot ID   -
Organism   Pseudomonas stutzeri DSM 10701     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 349302..359709
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PSJM300_01630 pyrB 349390..350406 (-) 1017 AFN76406.1 aspartate carbamoyltransferase catalytic subunit -
  PSJM300_01635 - 350416..350928 (-) 513 AFN76407.1 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase -
  PSJM300_01640 - 350951..351379 (-) 429 AFN76408.1 Holliday junction resolvase-like protein -
  PSJM300_01645 - 351376..351945 (-) 570 AFN76409.1 hypothetical protein -
  PSJM300_01650 - 352075..352971 (-) 897 AFN76410.1 TonB family protein -
  PSJM300_01655 - 353115..354065 (-) 951 AFN76411.1 glutathione synthetase -
  PSJM300_01660 pilG 354302..354709 (+) 408 AFN76412.1 response regulator receiver protein Regulator
  PSJM300_01665 - 354754..355119 (+) 366 AFN76413.1 type IV pilus response regulator PilH -
  PSJM300_01670 - 355311..355697 (+) 387 AFN76414.1 twitching motility protein PilI -
  PSJM300_01675 - 355775..357823 (+) 2049 AFN76415.1 twitching motility protein PilJ -
  PSJM300_01680 - 357883..358749 (+) 867 AFN76416.1 methyltransferase PilK -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14868.30 Da        Isoelectric Point: 7.2439

>NTDB_id=20441 PSJM300_01660 AFN76412.1 354302..354709(+) (pilG) [Pseudomonas stutzeri DSM 10701]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQIS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=20441 PSJM300_01660 AFN76412.1 354302..354709(+) (pilG) [Pseudomonas stutzeri DSM 10701]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGGACCGCCGAGACGCTATT
GAAGAAAGTGGGTTGTGACGTCATCACGGCAGTCGACGGTTTCGATGCGCTCGCCAAGATAGCGGACACTCACCCCCGCA
TCATCTTCGTCGATATCATGATGCCTCGGCTGGATGGTTATCAGACCTGTGCGCTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTAATCATGCTGTCGTCCAAGGATGGTCTGTTCGACAAGGCCAAGGGCCGCATCGTGGGATCCGACCAGTA
CCTGACCAAACCGTTCAGCAAAGAAGAGTTGCTCGGTGCAATCAAGGCGCATGTGCCTGATTTCGCACCGGTAGAGCAAA
TATCCTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

44.444

86.667

0.385

Multiple sequence alignment