Detailed information    

insolico Bioinformatically predicted

Overview

Name   chpA   Type   Regulator
Locus tag   BMU11_RS00760 Genome accession   NZ_CP017938
Coordinates   179655..184160 (-) Length   1501 a.a.
NCBI ID   WP_078219658.1    Uniprot ID   -
Organism   Acinetobacter pittii strain YMC2010/8/T346     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 174655..189160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BMU11_RS00730 (BMU11_00665) - 174978..175346 (-) 369 WP_017385889.1 YbaN family protein -
  BMU11_RS00735 (BMU11_00670) - 175450..176331 (+) 882 WP_017385890.1 DUF1853 family protein -
  BMU11_RS00740 (BMU11_00675) - 176455..176598 (+) 144 WP_014207555.1 entericidin A/B family lipoprotein -
  BMU11_RS00745 (BMU11_00680) dapE 176725..177861 (+) 1137 WP_078219656.1 succinyl-diaminopimelate desuccinylase -
  BMU11_RS00750 (BMU11_00685) - 177997..178878 (-) 882 WP_078219657.1 alpha/beta fold hydrolase -
  BMU11_RS00755 (BMU11_00690) - 179188..179655 (-) 468 WP_213033965.1 hypothetical protein -
  BMU11_RS00760 (BMU11_00695) chpA 179655..184160 (-) 4506 WP_078219658.1 hybrid sensor histidine kinase/response regulator Regulator
  BMU11_RS00765 (BMU11_00700) pilJ 184308..186386 (-) 2079 WP_017482145.1 methyl-accepting chemotaxis protein -
  BMU11_RS00770 (BMU11_00705) pilI 186429..186965 (-) 537 WP_002116439.1 chemotaxis protein CheW -
  BMU11_RS00775 (BMU11_00710) pilH 187026..187388 (-) 363 WP_002116220.1 response regulator -
  BMU11_RS00780 (BMU11_00715) pilG 187411..187794 (-) 384 WP_000389061.1 twitching motility response regulator PilG Regulator
  BMU11_RS00785 (BMU11_00720) - 188079..188717 (+) 639 WP_213033966.1 hypothetical protein -

Sequence

Protein


Download         Length: 1501 a.a.        Molecular weight: 171242.72 Da        Isoelectric Point: 4.4690

>NTDB_id=204247 BMU11_RS00760 WP_078219658.1 179655..184160(-) (chpA) [Acinetobacter pittii strain YMC2010/8/T346]
MKEILKTLTEAMMLPEDSYSQQDDEFLEIFVEEIEEIFVELQSLIHEWMQSENVATLTEIRRHFHTLKGSGRMIGAKSSA
ELAWTVEDTLNRVINQSLGLTPNIQQYVQLVFKFYFFKLVDDFKSKKNHTLDFRPLILLGQQLQQQQSIEPALDELLLLS
DILTAKTQTGLEANDLEPESTEVLTISTPEVAIETEQTLAETLILFMEEAEEHLATIDQFLEKEIHQHESYNALIRALHT
LRGSSAMAHVEPIFEASTKVEHLFKILLQEELSSHSEEISLLRDYRQFIRNSLDLLAAHCSTEQLESDLQKFNQVWDTYM
EQHGEHSSPLMPPHGLVSQLLQLNVAELLDAELDFEKGIRTEFPHYLERLSEQADVLLQHTQSQAMIGLYEYTNQLKESY
DILLDRPDLLQSDYVFEIYQKAHQQLIQLFDALAAGQRVSIIEQHQNVLDELKLYTQYIPNLNSKSLETHQDVFEPLFNA
EVEQTANEPLIENVFTDQVTIGQSVQLDRQFISSEHVNRHFDPDLLDIFLEEADELLEGIDTDLNLWVNDQENFAALNNL
MRYLHTLKGGANMIQATYIGLIAHELESIYERLIQKQLIASSALIDFIRLVQDDLADRLQIVREQHLDYAASHTIQALKN
AGQVFDSHIKESKTEPETYVIPELNFEVLQQEAINNTALNLSELTSGSEQIAKSNNQLVEQTELQVLYADHNHTESIPDQ
DINTVVEQTFMEEAAELLEMADHLLKQWFEQRTNRSILLQLQRAVHSLKGGSRMLGLETVQAIAYQLENAFEQFALHHFS
SNIYDNLLESAIVWLKEAIFKQNYQHFDGLQQSLENIQFIETAIQIPSKLTRTDLFSTEPVMSFVQGDGTEPPPMMGEWE
QAQRLDQNNEMIRVSADLIEKMIDLSGENSINRSRIEMDLSQFGHTLAEMELAIQRLADQLRRMEGELETQIIAKHGIEN
SRYTEFDPLEMDQYSSLNQLSKSLAESASDLVDFKNTLSEKIRDTEGLLVQQSRIQAEIQEGLMRTRLVPFSRLLPRLQR
IVRQTSTALNRPAELFVNNTEGELDRTMLERLVTPLEHMLRNAIDHGLEDRAQREQAQKPETGRIELNIHRQGTDVVVTF
KDDGQGIDIEKVRQKALMSGLINPEQVLEHQDILQLIFHPGLSTADQVTQISGRGVGLDVVQSDIKALGGHVSVDSVYGQ
GTVFTIRVPTTVAVSDALMVKVADQQFAIPLAQIDRIVRVSPASLEQYFGSAQELFEFENKRYPLRYLSEFVGNQPIPRL
SGMMYSLPVLMIKANNGQTVALLVDQLIGSRAQIVVKPIGQQFSSIGAIAGATILGDGQVCLILDGQNIARQIQSTHRHK
SLNETIYRQRESDERRLIMIVDDSVTVRKVTSRLLERQGYDVVTAKDGVDAIEQLENIKPDLMLLDIEMPRMDGFEVLNL
VRHHDLHQDMPVIMITSRTGEKHRERAFTLGVNQYMGKPFQEEDLLHNIDALFMTFEGGLA

Nucleotide


Download         Length: 4506 bp        

>NTDB_id=204247 BMU11_RS00760 WP_078219658.1 179655..184160(-) (chpA) [Acinetobacter pittii strain YMC2010/8/T346]
ATGAAAGAAATATTAAAAACTTTAACTGAAGCAATGATGCTACCGGAAGATAGCTACTCTCAACAAGATGATGAATTTCT
TGAAATATTTGTCGAAGAAATTGAAGAAATTTTTGTTGAATTACAATCTTTGATTCACGAATGGATGCAATCTGAAAATG
TTGCTACGCTTACTGAAATCCGCCGTCATTTTCATACATTGAAAGGTTCAGGGCGAATGATTGGTGCCAAATCTTCTGCT
GAGCTTGCTTGGACTGTTGAAGATACGCTTAATCGGGTAATCAATCAGAGTCTCGGATTAACTCCTAACATCCAACAATA
TGTTCAGTTGGTATTTAAGTTCTATTTCTTTAAGTTAGTAGATGACTTCAAATCTAAAAAAAATCATACCCTAGACTTTA
GGCCCCTAATTTTATTGGGACAACAATTACAGCAACAGCAAAGTATAGAACCCGCGTTAGACGAACTTTTATTATTATCA
GATATTCTTACTGCTAAAACTCAAACTGGTTTAGAAGCGAATGACTTAGAACCAGAATCAACTGAAGTTTTAACTATTTC
GACTCCAGAAGTTGCTATAGAAACTGAACAGACTCTTGCTGAAACCTTAATTTTATTTATGGAAGAAGCAGAAGAGCACT
TAGCGACAATTGATCAGTTTTTGGAAAAAGAAATACATCAGCATGAAAGTTATAATGCTCTAATACGTGCGTTACATACA
TTACGTGGCAGCTCTGCCATGGCTCATGTAGAACCAATCTTTGAAGCTAGTACCAAAGTTGAGCATTTATTTAAAATACT
ATTACAAGAAGAGCTTTCTTCTCACTCTGAAGAAATTTCATTACTCCGTGATTATCGTCAGTTTATTCGAAATAGTTTAG
ATCTATTGGCTGCACATTGCTCTACTGAGCAATTGGAATCTGATTTACAGAAATTTAATCAGGTTTGGGATACTTACATG
GAGCAGCATGGTGAGCATTCAAGCCCACTTATGCCTCCACATGGTTTAGTGTCTCAGCTATTACAGCTAAATGTTGCTGA
ATTACTTGATGCGGAATTAGACTTTGAGAAGGGAATACGTACAGAGTTTCCTCATTATCTTGAACGTTTAAGTGAACAAG
CAGATGTTTTGCTGCAACACACTCAGTCGCAGGCAATGATTGGTTTATATGAATATACTAACCAGTTGAAAGAAAGCTAC
GACATATTGCTTGATCGACCTGATTTATTGCAATCAGATTATGTTTTTGAAATTTATCAAAAAGCGCACCAACAATTAAT
TCAGTTATTTGATGCATTAGCCGCAGGACAAAGAGTAAGTATCATTGAGCAACACCAAAATGTCTTGGACGAGCTAAAAC
TATATACTCAATATATTCCAAATCTTAATTCCAAATCATTAGAAACTCATCAAGACGTTTTTGAACCATTGTTTAATGCT
GAAGTTGAACAAACGGCGAATGAACCTCTGATAGAAAATGTATTCACTGATCAGGTCACCATAGGGCAGAGTGTACAACT
AGATCGACAATTCATTTCGTCTGAGCATGTAAACCGTCATTTTGATCCAGATCTTTTAGATATTTTTCTTGAAGAAGCCG
ATGAGTTGCTTGAAGGAATAGATACAGATCTTAATCTTTGGGTTAATGATCAAGAAAACTTTGCCGCTCTCAATAATCTG
ATGCGTTATTTGCATACCTTAAAAGGTGGGGCAAATATGATTCAGGCAACTTATATTGGTTTAATTGCACATGAGTTAGA
AAGTATTTATGAGCGTTTAATTCAAAAACAGTTGATAGCTTCGTCTGCTCTCATTGATTTTATTCGACTAGTTCAAGATG
ACTTGGCTGACCGTCTTCAAATAGTGCGTGAACAGCACCTAGATTATGCTGCTTCTCATACTATTCAAGCACTTAAAAAT
GCAGGTCAGGTATTTGATTCTCATATTAAAGAGAGCAAAACAGAACCTGAAACGTATGTTATACCTGAATTAAATTTTGA
AGTATTACAACAAGAAGCGATAAATAATACGGCGTTAAACCTCAGTGAGTTAACTTCTGGTTCTGAGCAGATTGCTAAGT
CTAATAATCAACTTGTTGAGCAAACCGAATTACAAGTTCTTTATGCTGATCACAATCATACAGAGAGTATCCCAGATCAA
GATATTAATACTGTTGTCGAGCAGACGTTTATGGAGGAAGCGGCCGAACTATTAGAAATGGCCGATCATCTATTAAAACA
ATGGTTCGAACAACGTACTAACCGTAGTATCTTGCTTCAACTACAAAGGGCAGTGCACAGCTTGAAAGGCGGTTCCCGTA
TGTTGGGACTTGAAACCGTGCAAGCGATTGCTTATCAACTTGAGAATGCTTTTGAACAATTTGCGCTTCATCATTTCAGC
TCAAATATTTATGACAACTTATTAGAGAGTGCAATTGTCTGGTTAAAAGAGGCAATTTTTAAACAAAATTATCAACACTT
CGATGGTTTACAACAAAGTCTGGAAAATATCCAGTTCATTGAAACAGCAATTCAAATTCCTAGTAAGTTAACTAGAACTG
ATCTATTCAGCACGGAACCTGTAATGAGTTTTGTGCAAGGTGACGGTACAGAACCACCGCCAATGATGGGTGAGTGGGAA
CAAGCACAACGCCTTGATCAAAATAATGAGATGATTCGAGTCTCGGCAGATTTAATTGAAAAAATGATTGATCTGTCTGG
TGAAAATTCGATTAACCGTTCGCGAATTGAAATGGATTTAAGCCAATTTGGTCATACCTTAGCGGAAATGGAATTGGCTA
TTCAGCGACTTGCAGATCAGTTGCGTCGAATGGAAGGCGAATTAGAAACCCAAATTATTGCAAAACACGGTATTGAGAAC
TCACGTTATACGGAATTTGATCCTTTAGAGATGGACCAATATTCTTCATTAAATCAGTTATCAAAGTCTCTTGCCGAGTC
TGCATCAGATTTAGTAGATTTTAAAAATACATTATCTGAAAAGATCAGAGACACTGAAGGTTTATTGGTACAGCAATCGC
GTATTCAGGCTGAAATTCAAGAAGGTCTTATGCGAACACGCTTAGTACCATTTTCTCGATTGTTGCCTCGTCTGCAAAGA
ATTGTGAGGCAGACTTCTACCGCGTTAAATCGACCAGCAGAGCTTTTTGTTAATAATACAGAAGGCGAGCTGGACCGGAC
AATGTTAGAACGTTTGGTTACGCCACTTGAGCACATGCTTAGAAACGCAATTGACCATGGACTAGAAGACCGTGCGCAAC
GTGAGCAAGCGCAGAAACCAGAAACGGGACGTATTGAACTCAATATTCATCGTCAAGGTACAGATGTTGTAGTTACATTT
AAGGATGATGGGCAAGGTATTGATATCGAGAAGGTTCGTCAAAAGGCGTTAATGTCTGGTTTGATTAATCCAGAGCAAGT
ATTAGAACATCAAGATATTTTACAGCTGATTTTCCATCCTGGTTTAAGTACAGCCGATCAAGTCACTCAGATTTCAGGTC
GTGGTGTAGGGCTGGATGTCGTGCAAAGTGATATTAAGGCCTTAGGTGGCCATGTGAGTGTCGACTCTGTATACGGGCAG
GGAACTGTCTTTACCATACGTGTTCCAACGACAGTAGCTGTTAGTGATGCTTTAATGGTTAAAGTTGCTGATCAGCAATT
TGCAATTCCATTGGCTCAGATTGATCGAATTGTACGAGTTTCACCAGCATCATTAGAACAATATTTCGGAAGTGCACAAG
AGCTCTTTGAATTTGAAAATAAGCGTTATCCATTACGTTATTTATCTGAGTTTGTTGGTAATCAACCAATTCCGCGCTTA
AGTGGAATGATGTATTCATTACCAGTATTAATGATTAAGGCAAATAATGGACAAACCGTCGCATTATTAGTTGACCAACT
GATTGGCTCACGCGCACAGATTGTAGTTAAGCCAATAGGACAACAATTCTCTAGCATTGGTGCGATTGCAGGAGCAACTA
TTTTAGGTGATGGCCAAGTTTGTCTAATTTTAGATGGACAAAATATTGCTCGCCAAATTCAATCTACTCACCGACATAAA
TCGCTTAATGAAACTATCTATAGACAACGAGAGTCTGATGAACGACGTCTCATCATGATTGTGGATGACTCAGTAACTGT
ACGTAAAGTAACCTCTCGTTTACTCGAGCGTCAAGGCTATGATGTTGTGACCGCTAAAGATGGGGTTGATGCCATTGAGC
AATTGGAAAATATTAAACCAGATCTCATGTTACTTGATATTGAAATGCCGCGAATGGATGGCTTTGAGGTACTTAACCTC
GTTCGACATCATGATCTACATCAAGATATGCCAGTGATTATGATTACATCACGAACTGGTGAAAAACACCGTGAACGAGC
ATTTACTTTAGGTGTTAACCAATACATGGGTAAACCTTTCCAAGAAGAAGACTTACTTCACAATATTGATGCGTTATTCA
TGACATTTGAAGGGGGACTTGCCTAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(1074-1210)

CheW-like domain (CheW)

(1217-1352)

Response regulator receiver domain (Response_reg)

(1378-1489)

Hpt domain (Hpt)

(25-107)

Hpt domain (Hpt)

(728-792)

Hpt domain (Hpt)

(524-606)

Hpt domain (Hpt)

(202-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  chpA Acinetobacter baumannii strain A118

80.119

100

0.805

Multiple sequence alignment