Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | K06K5_RS14700 | Genome accession | NZ_CP017907 |
| Coordinates | 3106671..3107264 (-) | Length | 197 a.a. |
| NCBI ID | WP_017633532.1 | Uniprot ID | A0A2I3CBG0 |
| Organism | Vibrio alginolyticus strain K06K5 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3101671..3112264
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| K06K5_RS14680 (K06K5_28790) | aroB | 3102556..3103656 (-) | 1101 | WP_005381318.1 | 3-dehydroquinate synthase | - |
| K06K5_RS14685 (K06K5_28800) | aroK | 3103689..3104207 (-) | 519 | WP_005381319.1 | shikimate kinase AroK | - |
| K06K5_RS14690 (K06K5_28810) | pilQ | 3104395..3106140 (-) | 1746 | WP_005382765.1 | type IV pilus secretin PilQ | Machinery gene |
| K06K5_RS14695 (K06K5_28820) | pilP | 3106166..3106681 (-) | 516 | WP_086047068.1 | pilus assembly protein PilP | Machinery gene |
| K06K5_RS14700 (K06K5_28830) | pilO | 3106671..3107264 (-) | 594 | WP_017633532.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| K06K5_RS14705 (K06K5_28840) | pilN | 3107257..3107832 (-) | 576 | WP_017821732.1 | PilN domain-containing protein | Machinery gene |
| K06K5_RS14710 (K06K5_28850) | pilM | 3107816..3108832 (-) | 1017 | WP_017821733.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| K06K5_RS14715 (K06K5_28860) | - | 3108977..3111538 (+) | 2562 | WP_025768081.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 22987.48 Da Isoelectric Point: 5.0885
>NTDB_id=203920 K06K5_RS14700 WP_017633532.1 3106671..3107264(-) (pilO) [Vibrio alginolyticus strain K06K5]
MVDWQDLEIDEMAEWPLLPQIVVIALLIMAIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
MVDWQDLEIDEMAEWPLLPQIVVIALLIMAIQGLGYWFYLKPKDEQLNHLIQQEQTLKVALKIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGEKQSEHFLYRLPLNIELTGDFHDIGHFSQAIATLPRII
TFKDVTWQRVSQESETLHFRVRANTYQFKPEETKNDK
Nucleotide
Download Length: 594 bp
>NTDB_id=203920 K06K5_RS14700 WP_017633532.1 3106671..3107264(-) (pilO) [Vibrio alginolyticus strain K06K5]
GTGGTTGATTGGCAGGATCTCGAAATAGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGCACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCAATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
GTGGTTGATTGGCAGGATCTCGAAATAGATGAAATGGCCGAGTGGCCATTGTTGCCCCAGATTGTAGTAATCGCACTTCT
GATCATGGCGATTCAAGGCTTAGGTTATTGGTTTTACCTTAAACCGAAAGACGAACAGTTGAATCACTTGATTCAGCAGG
AGCAGACACTCAAGGTGGCATTGAAGATCAAAGCGAACAAAGTGGCAGCGTTGCCTCAGCTTCAATCTCAATTGGATGAA
CTTACCACTCGTTACGAGTTATTACTGCAACAACTGCCTGCGCAAAAAGAGCTGGCTACAATGCTCGCTTCAGTGAATGA
GCTTGGCATCGACAATAAGCTGACTTTCACCCGAATCGACTGGGGCGAAAAACAATCAGAGCACTTCCTTTATCGTCTCC
CTTTAAACATAGAGTTAACGGGCGACTTTCATGACATCGGCCATTTTTCTCAGGCAATAGCGACGCTACCTCGAATCATC
ACGTTTAAAGATGTGACTTGGCAACGTGTCAGCCAAGAGAGCGAAACCCTGCACTTTCGGGTGCGTGCTAATACCTATCA
GTTTAAGCCGGAGGAGACGAAAAATGACAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
87.368 |
96.447 |
0.843 |
| pilO | Vibrio cholerae strain A1552 |
70.681 |
96.954 |
0.685 |