Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | SMA_0630 | Genome accession | HE613569 |
| Coordinates | 631466..633268 (+) | Length | 600 a.a. |
| NCBI ID | CCF01921.1 | Uniprot ID | - |
| Organism | Streptococcus macedonicus ACA-DC 198 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 626466..638268
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SMA_0625 | queA | 627125..628153 (-) | 1029 | CCF01916.1 | S-adenosylmethionine:tRNA ribosyltransferase-isomerase | - |
| SMA_0626 | - | 628328..628828 (+) | 501 | Protein_625 | Hypothetical protein | - |
| SMA_0627 | nagB | 628956..629660 (+) | 705 | CCF01918.1 | Glucosamine-6-phosphate deaminase | - |
| SMA_0628 | ytzG | 629736..630452 (+) | 717 | CCF01919.1 | Ribosomal small subunit pseudouridine synthase A | - |
| SMA_0629 | - | 630505..631476 (+) | 972 | CCF01920.1 | Competence protein CoiA | - |
| SMA_0630 | pepF | 631466..633268 (+) | 1803 | CCF01921.1 | Oligoendopeptidase F | Regulator |
| SMA_0631 | - | 633342..633860 (+) | 519 | Protein_630 | Acetyltransferase, GNAT family | - |
| SMA_0632 | gph | 633882..634493 (+) | 612 | CCF01923.1 | Hydrolase, haloacid dehalogenase-like family | - |
| SMA_0633 | yrrM | 634547..635248 (+) | 702 | CCF01924.1 | O-methyltransferase family protein [C1] | - |
| SMA_0634 | prsA | 635318..636349 (+) | 1032 | CCF01925.1 | Foldase protein PrsA 1 precursor | - |
Sequence
Protein
Download Length: 600 a.a. Molecular weight: 68920.02 Da Isoelectric Point: 4.6248
>NTDB_id=20347 SMA_0630 CCF01921.1 631466..633268(+) (pepF) [Streptococcus macedonicus ACA-DC 198]
MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDGDLENAKAYKGRLTASSNDLLAITESYLALSRRLEKLYVYASMKND
QDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEAFEDFVAETPALSAYAHFFEQLFKRQPHVLSQAEEELLAGA
QEIFGAAGETFELLDNADIIFPIVLDDKGKEIQLTHGNFITLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH
NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMYDIHTPLSEMDMSFTYEEALA
KAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFILLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY
LNQLYADLNEKYYGLSKADNPEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTKADIDRYLDYLKAGNSDYPL
NVIKKAGVDMTTSAYLDAAFRIFEERLDELEALIEKGAQL
MSDNRSHIDEKYQWDLSTVFATDDAWEAELASLDGDLENAKAYKGRLTASSNDLLAITESYLALSRRLEKLYVYASMKND
QDTTVAKYQEYQAKATAIYAKFSEIFAFYEPELMQLSKEAFEDFVAETPALSAYAHFFEQLFKRQPHVLSQAEEELLAGA
QEIFGAAGETFELLDNADIIFPIVLDDKGKEIQLTHGNFITLLESKNRDVRKEAYQALYATYEQFQHTYAKTLQTNVKVH
NYEARVHHFKSAREAALSANFIPESVYDTLIETVNANLPLLHRYVELRKKILKLDDLKMYDIHTPLSEMDMSFTYEEALA
KAEDVLAVFGKEYSERVHRAFTERWIDVHVNKGKRSGAYSGGSYDTNAFILLNWQDTLDNLFTLVHETGHSLHSTFTREN
QPYVYGDYSIFLAEIASTTNENILTETLLKEVDDDKARFAILNHYLDGFKSTIFRQAQFAEFEDIIHKADQAGEVLTSDY
LNQLYADLNEKYYGLSKADNPEIQYEWARIPHFYYNYYVYQYATGFAAASYLADKIVHGTKADIDRYLDYLKAGNSDYPL
NVIKKAGVDMTTSAYLDAAFRIFEERLDELEALIEKGAQL
Nucleotide
Download Length: 1803 bp
>NTDB_id=20347 SMA_0630 CCF01921.1 631466..633268(+) (pepF) [Streptococcus macedonicus ACA-DC 198]
ATGTCAGATAATCGTAGTCATATTGATGAAAAATACCAATGGGATTTAAGCACAGTTTTTGCCACAGATGATGCTTGGGA
AGCGGAGCTGGCTAGCCTTGATGGTGATTTAGAAAATGCTAAAGCTTACAAAGGGCGTTTGACAGCGTCAAGTAATGATT
TGCTTGCTATTACGGAAAGTTACCTTGCCTTGTCGCGTCGTTTGGAGAAGCTTTATGTTTATGCTTCAATGAAAAACGAC
CAAGATACAACAGTAGCCAAATACCAAGAATACCAAGCTAAAGCAACAGCAATCTATGCCAAATTTAGTGAAATTTTTGC
TTTTTACGAACCTGAATTGATGCAATTGTCTAAAGAAGCTTTTGAGGATTTCGTGGCAGAAACACCAGCTTTATCTGCTT
ATGCACATTTCTTTGAGCAACTTTTCAAACGTCAACCGCATGTTTTGTCACAGGCTGAGGAAGAATTATTAGCAGGTGCG
CAAGAAATTTTTGGAGCTGCAGGAGAAACATTTGAGCTTTTGGATAATGCTGACATCATTTTTCCAATCGTTCTAGATGA
TAAGGGCAAAGAAATTCAGCTAACGCATGGTAATTTCATTACCTTGTTAGAATCAAAAAATCGTGATGTCCGCAAAGAAG
CTTACCAAGCTTTGTATGCAACTTATGAACAATTCCAACACACTTATGCGAAAACCTTGCAAACCAATGTCAAAGTGCAT
AACTATGAAGCTCGTGTTCATCATTTTAAATCAGCACGTGAGGCAGCACTTTCGGCTAATTTTATTCCAGAATCTGTTTA
TGATACCCTGATTGAAACGGTCAATGCTAACCTGCCTTTGCTTCATCGTTATGTGGAACTTCGCAAGAAAATCCTTAAAC
TGGATGATTTGAAAATGTACGATATTCATACGCCACTTTCTGAAATGGATATGAGTTTTACCTATGAAGAAGCTTTGGCA
AAAGCTGAAGATGTCTTAGCTGTTTTTGGCAAAGAATATTCTGAGCGTGTTCATCGTGCTTTTACAGAACGCTGGATTGA
CGTCCATGTCAATAAAGGCAAACGCTCTGGTGCCTACTCTGGTGGTTCGTATGATACCAATGCTTTCATACTGTTAAATT
GGCAAGATACCTTGGATAATTTGTTTACCTTAGTTCACGAAACGGGGCACAGCTTGCATTCGACATTTACACGTGAAAAT
CAACCCTATGTTTATGGAGATTATAGTATTTTCTTGGCAGAAATTGCTTCAACAACTAATGAAAATATTTTGACAGAAAC
ACTTTTGAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCATTATCTTGATGGTTTCAAGAGTACCATTT
TCCGTCAAGCACAATTTGCGGAATTTGAAGATATTATCCATAAGGCAGACCAAGCTGGAGAAGTGTTGACGAGTGATTAT
CTCAACCAACTTTATGCCGACTTAAACGAGAAATATTATGGACTCAGCAAAGCAGACAACCCAGAAATCCAATACGAATG
GGCACGCATTCCGCATTTCTACTACAATTACTATGTTTACCAATACGCCACAGGATTTGCGGCAGCTAGTTATTTAGCTG
ATAAGATTGTTCACGGTACAAAAGCTGATATTGACCGCTACCTTGATTATTTGAAAGCAGGTAATTCTGATTATCCGCTT
AATGTGATTAAAAAAGCTGGTGTGGATATGACAACAAGTGCTTATCTAGACGCTGCTTTCCGAATTTTCGAGGAACGCTT
GGATGAGTTGGAAGCTTTAATTGAAAAAGGGGCACAACTATAA
ATGTCAGATAATCGTAGTCATATTGATGAAAAATACCAATGGGATTTAAGCACAGTTTTTGCCACAGATGATGCTTGGGA
AGCGGAGCTGGCTAGCCTTGATGGTGATTTAGAAAATGCTAAAGCTTACAAAGGGCGTTTGACAGCGTCAAGTAATGATT
TGCTTGCTATTACGGAAAGTTACCTTGCCTTGTCGCGTCGTTTGGAGAAGCTTTATGTTTATGCTTCAATGAAAAACGAC
CAAGATACAACAGTAGCCAAATACCAAGAATACCAAGCTAAAGCAACAGCAATCTATGCCAAATTTAGTGAAATTTTTGC
TTTTTACGAACCTGAATTGATGCAATTGTCTAAAGAAGCTTTTGAGGATTTCGTGGCAGAAACACCAGCTTTATCTGCTT
ATGCACATTTCTTTGAGCAACTTTTCAAACGTCAACCGCATGTTTTGTCACAGGCTGAGGAAGAATTATTAGCAGGTGCG
CAAGAAATTTTTGGAGCTGCAGGAGAAACATTTGAGCTTTTGGATAATGCTGACATCATTTTTCCAATCGTTCTAGATGA
TAAGGGCAAAGAAATTCAGCTAACGCATGGTAATTTCATTACCTTGTTAGAATCAAAAAATCGTGATGTCCGCAAAGAAG
CTTACCAAGCTTTGTATGCAACTTATGAACAATTCCAACACACTTATGCGAAAACCTTGCAAACCAATGTCAAAGTGCAT
AACTATGAAGCTCGTGTTCATCATTTTAAATCAGCACGTGAGGCAGCACTTTCGGCTAATTTTATTCCAGAATCTGTTTA
TGATACCCTGATTGAAACGGTCAATGCTAACCTGCCTTTGCTTCATCGTTATGTGGAACTTCGCAAGAAAATCCTTAAAC
TGGATGATTTGAAAATGTACGATATTCATACGCCACTTTCTGAAATGGATATGAGTTTTACCTATGAAGAAGCTTTGGCA
AAAGCTGAAGATGTCTTAGCTGTTTTTGGCAAAGAATATTCTGAGCGTGTTCATCGTGCTTTTACAGAACGCTGGATTGA
CGTCCATGTCAATAAAGGCAAACGCTCTGGTGCCTACTCTGGTGGTTCGTATGATACCAATGCTTTCATACTGTTAAATT
GGCAAGATACCTTGGATAATTTGTTTACCTTAGTTCACGAAACGGGGCACAGCTTGCATTCGACATTTACACGTGAAAAT
CAACCCTATGTTTATGGAGATTATAGTATTTTCTTGGCAGAAATTGCTTCAACAACTAATGAAAATATTTTGACAGAAAC
ACTTTTGAAAGAAGTTGATGATGACAAAGCACGCTTTGCAATTTTGAATCATTATCTTGATGGTTTCAAGAGTACCATTT
TCCGTCAAGCACAATTTGCGGAATTTGAAGATATTATCCATAAGGCAGACCAAGCTGGAGAAGTGTTGACGAGTGATTAT
CTCAACCAACTTTATGCCGACTTAAACGAGAAATATTATGGACTCAGCAAAGCAGACAACCCAGAAATCCAATACGAATG
GGCACGCATTCCGCATTTCTACTACAATTACTATGTTTACCAATACGCCACAGGATTTGCGGCAGCTAGTTATTTAGCTG
ATAAGATTGTTCACGGTACAAAAGCTGATATTGACCGCTACCTTGATTATTTGAAAGCAGGTAATTCTGATTATCCGCTT
AATGTGATTAAAAAAGCTGGTGTGGATATGACAACAAGTGCTTATCTAGACGCTGCTTTCCGAATTTTCGAGGAACGCTT
GGATGAGTTGGAAGCTTTAATTGAAAAAGGGGCACAACTATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
70.333 |
100 |
0.703 |