Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | BLD37_RS04085 | Genome accession | NZ_CP017868 |
| Coordinates | 772269..772574 (-) | Length | 101 a.a. |
| NCBI ID | WP_002834517.1 | Uniprot ID | A0A5T0ZVB2 |
| Organism | Campylobacter coli strain MG1116 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 767269..777574
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLD37_RS04050 (BLD37_04050) | - | 767684..768445 (+) | 762 | WP_025431509.1 | ATP-binding protein | - |
| BLD37_RS04055 (BLD37_04055) | - | 768442..769125 (+) | 684 | WP_002791740.1 | 3-methyladenine DNA glycosylase | - |
| BLD37_RS04060 (BLD37_04060) | thiD | 769125..769937 (+) | 813 | WP_002797568.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| BLD37_RS04065 (BLD37_04065) | thiE | 769927..770559 (+) | 633 | WP_002834515.1 | thiamine phosphate synthase | - |
| BLD37_RS04070 (BLD37_04070) | - | 770537..771166 (+) | 630 | WP_002777119.1 | uroporphyrinogen-III synthase | - |
| BLD37_RS04075 (BLD37_04075) | - | 771159..771611 (-) | 453 | WP_002777117.1 | hypothetical protein | - |
| BLD37_RS04080 (BLD37_04080) | - | 771608..772276 (-) | 669 | WP_002797569.1 | hypothetical protein | - |
| BLD37_RS04085 (BLD37_04085) | ctsT | 772269..772574 (-) | 306 | WP_002834517.1 | hypothetical protein | Machinery gene |
| BLD37_RS04090 (BLD37_04090) | proC | 772571..773308 (-) | 738 | WP_002834520.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| BLD37_RS04095 (BLD37_04095) | fliW | 773308..773697 (-) | 390 | WP_002777093.1 | flagellar assembly protein FliW | - |
| BLD37_RS04100 (BLD37_04100) | - | 773861..774508 (+) | 648 | WP_002777091.1 | outer membrane protein assembly factor BamD | - |
| BLD37_RS04105 (BLD37_04105) | lon | 774524..776899 (+) | 2376 | WP_071314967.1 | endopeptidase La | - |
| BLD37_RS04110 (BLD37_04110) | rpsR | 776955..777215 (-) | 261 | WP_002777087.1 | 30S ribosomal protein S18 | - |
Sequence
Protein
Download Length: 101 a.a. Molecular weight: 12456.28 Da Isoelectric Point: 6.0633
>NTDB_id=203399 BLD37_RS04085 WP_002834517.1 772269..772574(-) (ctsT) [Campylobacter coli strain MG1116]
MKVAFSLLELILYIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
MKVAFSLLELILYIIILGLIFTSISKLFYQLNDNHDYLNYFERLYTLQDKLYTDPHQRDIKLHIQNLKTFDFKENFVNDN
IFQFKKLHIQNQDYSLYFYDE
Nucleotide
Download Length: 306 bp
>NTDB_id=203399 BLD37_RS04085 WP_002834517.1 772269..772574(-) (ctsT) [Campylobacter coli strain MG1116]
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTATATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
ATGAAAGTTGCATTCTCGCTTTTAGAATTAATTCTTTATATAATTATCCTAGGATTAATTTTTACAAGTATTTCTAAATT
ATTTTATCAGCTAAATGACAATCATGATTATTTAAATTATTTTGAAAGATTATACACACTGCAAGATAAACTTTATACCG
ATCCTCATCAAAGAGATATAAAACTTCATATACAGAATTTAAAAACTTTTGATTTTAAAGAAAACTTTGTAAATGATAAT
ATCTTTCAATTTAAAAAATTACATATTCAAAATCAAGATTACTCCCTATATTTTTACGATGAATAA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
50 |
97.03 |
0.485 |