Detailed information
Bioinformatically predicted
Overview
| Name | comQ | Type | Machinery gene |
| Locus tag | BG256_RS06865 | Genome accession | NZ_CP017811 |
| Coordinates | 1389181..1389468 (+) | Length | 95 a.a. |
| NCBI ID | WP_012055313.1 | Uniprot ID | - |
| Organism | Haemophilus influenzae strain NML-Hia-1 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1384181..1394468
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BG256_RS06840 (BG256_06840) | nrfE | 1384258..1386165 (-) | 1908 | WP_071163115.1 | heme lyase NrfEFG subunit NrfE | - |
| BG256_RS06845 (BG256_06845) | suhB | 1386274..1387077 (-) | 804 | WP_048951686.1 | inositol-1-monophosphatase | - |
| BG256_RS06850 (BG256_06850) | comN | 1387277..1387789 (+) | 513 | WP_013526183.1 | pilus assembly FimT family protein | Machinery gene |
| BG256_RS06855 (BG256_06855) | comO | 1387789..1388505 (+) | 717 | WP_005651546.1 | PulJ/GspJ family protein | Machinery gene |
| BG256_RS06860 (BG256_06860) | comP | 1388505..1389188 (+) | 684 | WP_071163116.1 | DUF2572 family protein | Machinery gene |
| BG256_RS06865 (BG256_06865) | comQ | 1389181..1389468 (+) | 288 | WP_012055313.1 | DUF5374 domain-containing protein | Machinery gene |
| BG256_RS06870 (BG256_06870) | recC | 1389514..1392894 (+) | 3381 | WP_071163117.1 | exodeoxyribonuclease V subunit gamma | - |
| BG256_RS06875 (BG256_06875) | nrdR | 1392949..1393398 (+) | 450 | WP_005648026.1 | transcriptional regulator NrdR | - |
Sequence
Protein
Download Length: 95 a.a. Molecular weight: 11021.82 Da Isoelectric Point: 9.2205
>NTDB_id=203144 BG256_RS06865 WP_012055313.1 1389181..1389468(+) (comQ) [Haemophilus influenzae strain NML-Hia-1]
MNKGMSFITLLFSLALFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
MNKGMSFITLLFSLALFSVLFLVFNQWTASQRKSAVKTYQDFQAIQIAENQAQRQFLGLACEQLIQQNGLTFRIQCENER
IIVRYPTSEILIKTQ
Nucleotide
Download Length: 288 bp
>NTDB_id=203144 BG256_RS06865 WP_012055313.1 1389181..1389468(+) (comQ) [Haemophilus influenzae strain NML-Hia-1]
ATGAATAAAGGAATGTCTTTTATTACATTGTTATTTTCTTTAGCTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
ATGAATAAAGGAATGTCTTTTATTACATTGTTATTTTCTTTAGCTTTATTTAGCGTTTTATTTCTTGTTTTTAATCAATG
GACGGCAAGCCAAAGAAAAAGTGCGGTGAAAACTTATCAAGATTTTCAGGCAATACAGATTGCGGAGAATCAAGCTCAAC
GCCAATTTTTAGGGTTAGCTTGTGAACAATTGATACAACAAAATGGCTTAACTTTTCGTATTCAATGTGAAAATGAACGT
ATTATTGTGCGTTATCCTACGAGTGAAATTTTGATAAAAACTCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comQ | Haemophilus influenzae Rd KW20 |
97.895 |
100 |
0.979 |