Detailed information NTG0203095

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CN03_RS04090
• Genome accession: NZ_CP017810
• Coordinates: 880859..882220 (-)
• Length: 453 a.a.
• NCBI ID: WP_075272916.1
• Uniprot ID: -
• Organism: Thalassolituus oleivorans strain K188
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 875859..887220

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CN03_RS04075 (CN03_04075)	-	876157..879567 (-)	3411	WP_075272914.1	PilC/PilY family type IV pilus protein	-
CN03_RS04080 (CN03_04080)	-	879564..880085 (-)	522	WP_041588510.1	PilX N-terminal domain-containing pilus assembly protein	-
CN03_RS04085 (CN03_04085)	-	880198..880755 (-)	558	WP_075272915.1	GspH/FimT family pseudopilin	-
CN03_RS04090 (CN03_04090)	pilR	880859..882220 (-)	1362	WP_075272916.1	sigma-54 dependent transcriptional regulator	Regulator
CN03_RS04095 (CN03_04095)	-	882379..883896 (-)	1518	WP_051052421.1	PAS domain-containing sensor histidine kinase	-
CN03_RS04100 (CN03_04100)	-	883982..885604 (+)	1623	WP_075272917.1	NAD+ synthase	-
CN03_RS04105 (CN03_04105)	-	885872..886693 (-)	822	WP_075272918.1	outer membrane protein assembly factor BamD	-

Sequence

Protein

• Length: 453 a.a.
• Molecular weight: 50553.82 Da
• Isoelectric Point: 4.9367

>NTDB_id=203095 CN03_RS04090 WP_075272916.1 880859..882220(-) (pilR) [Thalassolituus oleivorans strain K188]
MQAVHTALIVDDEPDIRRLIALTLERMGLVCYQAENVSEALTSLEERQYHFCITDMKLPDGDGLELTQLCNRKYPDMPIA
MITAYGNMDLAVNALKSGAFDFVAKPIDTERLRQLVKAALQLTRVPTTGVVPATELLGSTPCMLALKDKIRKVARTQAPV
FVYGESGTGKELVAQLIHCQSARADKPFIAVNCGAIPTELMESEFFGHTKGSFTGATSNKNGFFKAADGGTLFLDEIAEL
PLDLQAKLLRVVQEKTVRSVGSENEEHIDVRIITASHDDLATMVSNHQFRQDLYFRLNVIQLDVPRLSERKDDIEELTHH
FITKYANEWSMPSTKLSEEALAALIDYSFPGNVRELENILQRAFTMMEGDIIRVDDLYFPANVAAELDSVTDDTPKEHAP
IATNNLEGYLENIEKRAIEEALLATRWNKTAAAEKLGISFRALRYRCKKLGID

Nucleotide

• Length: 1362 bp

>NTDB_id=203095 CN03_RS04090 WP_075272916.1 880859..882220(-) (pilR) [Thalassolituus oleivorans strain K188]
ATGCAAGCTGTACACACAGCACTCATCGTCGATGATGAACCCGATATTCGTCGTTTAATTGCGCTCACACTCGAACGTAT
GGGCCTAGTCTGCTATCAAGCAGAAAACGTAAGCGAAGCGCTAACCTCGCTAGAGGAGCGGCAATATCACTTCTGCATAA
CCGATATGAAACTCCCCGATGGTGATGGTCTGGAGCTTACCCAGCTGTGCAATCGCAAATATCCCGACATGCCCATTGCT
ATGATTACGGCCTACGGCAATATGGATCTCGCCGTCAACGCCCTCAAATCAGGCGCATTCGACTTTGTCGCTAAGCCAAT
TGATACCGAACGTCTGCGTCAGCTAGTAAAAGCAGCACTGCAATTAACACGAGTACCAACGACAGGCGTTGTTCCAGCCA
CGGAACTATTGGGTTCAACCCCATGCATGCTGGCGCTAAAAGATAAAATTCGAAAAGTTGCTCGCACCCAAGCACCGGTA
TTTGTTTATGGTGAGTCAGGCACAGGAAAAGAACTTGTCGCACAATTGATTCACTGCCAAAGCGCCCGCGCGGATAAGCC
TTTTATCGCCGTTAACTGCGGTGCCATCCCAACCGAATTAATGGAAAGCGAGTTTTTTGGGCATACAAAAGGAAGCTTCA
CTGGAGCAACTAGCAATAAGAATGGTTTTTTTAAAGCTGCCGACGGCGGTACATTATTCCTAGATGAAATTGCCGAACTG
CCCTTGGATTTACAGGCTAAATTACTCCGAGTTGTGCAGGAAAAGACGGTTCGCAGCGTCGGTTCGGAAAATGAAGAACA
TATTGATGTTCGCATCATAACGGCCAGTCATGACGATCTTGCCACTATGGTGAGCAACCACCAATTTCGCCAAGACTTAT
ATTTCCGCCTTAATGTTATTCAACTAGACGTCCCCCGCCTGTCCGAGCGTAAAGACGACATTGAAGAATTAACCCACCAC
TTTATTACCAAGTACGCCAACGAGTGGAGCATGCCCAGTACGAAGCTGAGCGAAGAAGCTCTGGCAGCGTTAATAGACTA
TTCATTTCCCGGCAACGTGCGAGAGCTTGAGAACATTCTGCAGCGTGCCTTCACCATGATGGAAGGCGATATTATTCGCG
TAGACGATTTGTATTTCCCGGCAAATGTCGCTGCTGAACTGGACTCCGTTACTGACGACACGCCTAAAGAGCACGCCCCC
ATTGCGACCAACAACCTTGAAGGTTACCTCGAAAATATTGAAAAACGCGCGATAGAAGAAGCTCTCCTAGCCACTCGCTG
GAATAAAACGGCAGCGGCAGAAAAACTTGGTATTAGCTTCCGAGCGCTGCGCTATCGTTGTAAGAAATTAGGCATAGATT
AA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (137-302)

• Bacterial regulatory protein, Fis family (HTH_8) (410-450)

• Response regulator receiver domain (Response_reg) (8-116)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	53.556	99.338	0.532
pilR	Acinetobacter baumannii strain A118	50	100	0.506