Detailed information NTG0020308

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: DN94_05790
• Genome accession: CP007565
• Coordinates: 1116507..1117733 (-)
• Length: 408 a.a.
• NCBI ID: AHX75185.1
• Uniprot ID: -
• Organism: Streptococcus agalactiae strain 138spar
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1111507..1122733

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DN94_05770	-	1113886..1114536 (-)	651	AHX75181.1	hypothetical protein	-
DN94_05775	-	1114548..1115018 (-)	471	AHX75182.1	hypothetical protein	-
DN94_05780	-	1115290..1115838 (+)	549	AHX75183.1	TetR family transcriptional regulator	-
DN94_05785	engB	1115900..1116496 (-)	597	AHX75184.1	GTP-binding protein	-
DN94_05790	clpX	1116507..1117733 (-)	1227	AHX75185.1	ATP-dependent protease	Regulator
DN94_05795	-	1117763..1117933 (-)	171	AHX75186.1	membrane protein	-
DN94_05800	-	1117950..1118444 (-)	495	AHX75187.1	dihydrofolate reductase	-
DN94_05805	-	1118524..1119363 (-)	840	AHX75188.1	thymidylate synthase	-
DN94_05810	-	1119412..1120689 (+)	1278	AHX75189.1	DNA-binding protein	-
DN94_05815	-	1120691..1121956 (+)	1266	AHX75190.1	3-hydroxy-3-methylglutaryl-CoA reductase	-
DN94_05820	-	1122016..1122465 (+)	450	AHX75191.1	hypothetical protein	-

Sequence

Protein

• Length: 408 a.a.
• Molecular weight: 44864.31 Da
• Isoelectric Point: 4.4424

>NTDB_id=20308 DN94_05790 AHX75185.1 1116507..1117733(-) (clpX) [Streptococcus agalactiae strain 138spar]
MAGNRNNDMNVYCSFCGKSQDEVKKIIAGNGVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLEILNQYVVGQDR
AKRALAVAVYNHYKRVSYTESSDDDVDLQKSNILMIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENIL
LKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQINTKN
ILFIVGGAFDGIEDLVKQRLGEKVIGFGQTSRKIDDNASYMQEIISEDIQKFGLIPEFIGRLPVVVALELLTAEDLVRIL
TEPRNALVKQYQTLLSYDGVELEFDQDALLAIADKAIERKTGARGLRSIIEETMLDIMFEIPSQEDVTKVRITKAAVEGT
DKPVLETA

Nucleotide

• Length: 1227 bp

>NTDB_id=20308 DN94_05790 AHX75185.1 1116507..1117733(-) (clpX) [Streptococcus agalactiae strain 138spar]
ATGGCTGGGAATCGTAATAACGATATGAATGTCTATTGTTCATTTTGTGGCAAAAGCCAAGATGAAGTAAAAAAAATTAT
TGCAGGTAATGGTGTTTTCATTTGTAATGAATGTGTAGCCTTATCACAAGAAATTATTAAGGAAGAATTAGCTGAGGAAG
TACTTGCTGATTTAGCAGAAGTACCAAAACCTAAGGAACTATTAGAAATATTAAATCAATATGTTGTAGGGCAAGATCGT
GCTAAACGTGCTTTAGCAGTTGCTGTCTACAATCATTACAAGCGTGTTAGTTATACCGAGAGTAGTGACGATGATGTAGA
TCTGCAAAAATCTAACATTTTGATGATTGGTCCAACTGGCTCAGGAAAAACCTTCTTAGCACAAACACTAGCTAAAAGCC
TTAATGTACCGTTTGCTATTGCAGATGCGACTTCATTGACTGAAGCAGGATACGTTGGAGAAGATGTTGAGAATATTCTT
CTTAAATTGATTCAAGCTGCTGATTATAATGTTGAACGTGCTGAGCGTGGTATTATCTACGTTGATGAAATAGATAAAAT
TGCTAAGAAAGGCGAAAATGTTTCTATCACACGTGATGTATCTGGTGAAGGTGTGCAGCAAGCCCTTCTTAAAATTATTG
AGGGTACGGTAGCAAGTGTTCCCCCACAGGGTGGGCGTAAACATCCTAACCAAGAAATGATTCAAATTAATACCAAGAAC
ATCCTTTTTATTGTAGGTGGTGCTTTTGATGGTATTGAAGACCTTGTGAAGCAACGTTTAGGCGAAAAAGTTATTGGTTT
TGGACAGACAAGTCGTAAAATTGATGACAACGCTTCTTATATGCAAGAGATAATTTCTGAGGATATTCAAAAGTTTGGAC
TGATTCCAGAGTTTATTGGCCGTTTACCAGTAGTTGTAGCGTTAGAACTTCTTACTGCAGAAGATCTGGTTCGTATTCTG
ACAGAACCACGCAATGCTTTGGTTAAACAATACCAAACCTTATTATCTTATGATGGTGTAGAATTGGAATTTGATCAGGA
TGCTCTATTGGCTATCGCTGATAAGGCTATCGAGCGCAAGACTGGTGCACGTGGTTTACGTTCTATTATTGAAGAAACGA
TGCTTGATATCATGTTTGAAATTCCAAGCCAAGAAGATGTAACAAAAGTTCGTATCACAAAGGCTGCTGTTGAGGGTACT
GACAAGCCTGTTTTAGAGACGGCTTAG

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (109-304)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (311-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.22	100	0.904
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58	98.039	0.569