Detailed information    

insolico Bioinformatically predicted

Overview

Name   comA/nlmT   Type   Regulator
Locus tag   Spy49_1580c Genome accession   CP000829
Coordinates   1560707..1561168 (-) Length   153 a.a.
NCBI ID   ACI61839.1    Uniprot ID   -
Organism   Streptococcus pyogenes NZ131     
Function   transport of ComC (predicted from homology)   
Competence regulation

Genomic Context

Location: 1555707..1566168
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  Spy49_1576c salR 1555876..1556481 (-) 606 ACI61835.1 Putative response regulator of salavaricin regulon -
  Spy49_1577c salK 1556462..1557883 (-) 1422 ACI61836.1 SalK -
  Spy49_1578c salY 1558064..1559971 (-) 1908 ACI61837.1 Putative ABC transporter -
  Spy49_1579c salX 1559973..1560710 (-) 738 ACI61838.1 Putative salivaricin A ABC transporter -
  Spy49_1580c comA/nlmT 1560707..1561168 (-) 462 ACI61839.1 Putative salivaricin A modification enzyme Regulator
  Spy49_1582c salB 1561242..1562867 (-) 1626 ACI61840.1 Putative salivaricin A modification enzyme, amino acid dehydration -
  Spy49_1583c salA 1562951..1563097 (-) 147 ACI61841.1 Lantibiotic salivaricin A precursor -
  Spy49_1584c lacG 1563609..1565042 (-) 1434 ACI61842.1 6-phospho-beta-galactosidase -

Sequence

Protein


Download         Length: 153 a.a.        Molecular weight: 17873.45 Da        Isoelectric Point: 7.3483

>NTDB_id=20299 Spy49_1580c ACI61839.1 1560707..1561168(-) (comA/nlmT) [Streptococcus pyogenes NZ131]
MYNISLGRESVSGEQVIETCKRVSLYEDIRSMPMKFHTPLFRDNPSLSGGQKQRISLARELVTTPRILVFDEPTSALDVK
TERIIQKNVEALHCTRILVTHRLNTVEKADKILIMDNGKIIDYGNHHYLYKNNKDYCDLYDSYMNKYQEEEVK

Nucleotide


Download         Length: 462 bp        

>NTDB_id=20299 Spy49_1580c ACI61839.1 1560707..1561168(-) (comA/nlmT) [Streptococcus pyogenes NZ131]
ATGTATAACATTTCGCTAGGGAGAGAATCTGTTTCAGGAGAACAGGTTATTGAAACTTGTAAAAGGGTATCACTATATGA
GGATATCAGGAGTATGCCAATGAAGTTTCATACACCACTTTTTCGAGATAATCCATCACTATCTGGGGGGCAAAAACAAC
GAATTTCTTTAGCAAGAGAACTTGTAACCACCCCTAGAATCTTAGTTTTTGACGAACCTACATCAGCTTTAGATGTAAAA
ACTGAAAGAATAATCCAAAAAAATGTTGAGGCTTTACATTGTACGAGGATTTTGGTTACCCACAGACTTAATACAGTTGA
AAAAGCTGATAAGATTTTAATAATGGATAATGGCAAAATTATTGACTATGGAAACCATCATTATTTGTACAAAAATAATA
AGGATTATTGTGACTTATATGACTCGTATATGAATAAATATCAGGAGGAAGAGGTAAAATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(29-75)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/nlmT Streptococcus mutans UA159

39.86

93.464

0.373
  comA Streptococcus mitis NCTC 12261

39.716

92.157

0.366
  rcrQ Streptococcus mutans UA159

37.333

98.039

0.366