Detailed information NTG0202989

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CJZ71_RS12175
• Genome accession: NZ_CP022891
• Coordinates: 2263554..2264666 (+)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_03
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2258554..2269666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ71_RS12150 (CJZ71_12150)	rnpA	2259264..2259614 (-)	351	WP_014481515.1	ribonuclease P protein component	-
CJZ71_RS12155 (CJZ71_12155)	rpmH	2259766..2259900 (-)	135	WP_003178075.1	50S ribosomal protein L34	-
CJZ71_RS12160 (CJZ71_12160)	dnaA	2260527..2261867 (+)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
CJZ71_RS12165 (CJZ71_12165)	dnaN	2262056..2263192 (+)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
CJZ71_RS12170 (CJZ71_12170)	rlbA	2263323..2263538 (+)	216	WP_003226810.1	ribosome maturation protein RlbA	-
CJZ71_RS12175 (CJZ71_12175)	recF	2263554..2264666 (+)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
CJZ71_RS12180 (CJZ71_12180)	remB	2264684..2264929 (+)	246	WP_003219266.1	extracellular matrix regulator RemB	-
CJZ71_RS12185 (CJZ71_12185)	gyrB	2264984..2266900 (+)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
CJZ71_RS12190 (CJZ71_12190)	gyrA	2267111..2269576 (+)	2466	WP_014475555.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=202989 CJZ71_RS12175 WP_014478578.1 2263554..2264666(+) (recF) [Bacillus subtilis strain DKU_NT_03]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=202989 CJZ71_RS12175 WP_014478578.1 2263554..2264666(+) (recF) [Bacillus subtilis strain DKU_NT_03]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995
recF	Streptococcus pneumoniae R6	45.628	98.919	0.451