Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0A   Type   Regulator
Locus tag   BK049_RS16155 Genome accession   NZ_CP017786
Coordinates   3162427..3163230 (+) Length   267 a.a.
NCBI ID   WP_008358592.1    Uniprot ID   A0AAC9NCX8
Organism   Bacillus xiamenensis strain VV3     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context


Location: 3157427..3168230
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BK049_RS16140 (BK049_16140) argR 3158449..3158898 (+) 450 WP_008358598.1 transcriptional regulator ArgR -
  BK049_RS16145 (BK049_16145) recN 3158933..3160666 (+) 1734 WP_071168952.1 DNA repair protein RecN Machinery gene
  BK049_RS16150 (BK049_16150) spoIVB 3160865..3162142 (+) 1278 WP_071168953.1 SpoIVB peptidase -
  BK049_RS16155 (BK049_16155) spo0A 3162427..3163230 (+) 804 WP_008358592.1 sporulation transcription factor Spo0A Regulator
  BK049_RS16165 (BK049_16165) - 3163687..3164787 (+) 1101 WP_008358589.1 Rap family tetratricopeptide repeat protein -
  BK049_RS16170 (BK049_16170) - 3165014..3165769 (+) 756 WP_071168954.1 glycerophosphodiester phosphodiesterase -
  BK049_RS16175 (BK049_16175) - 3165787..3166023 (-) 237 WP_008358585.1 DUF2627 domain-containing protein -

Sequence


Protein


Download         Length: 267 a.a.        Molecular weight: 29919.46 Da        Isoelectric Point: 6.3913

>NTDB_id=202943 BK049_RS16155 WP_008358592.1 3162427..3163230(+) (spo0A) [Bacillus xiamenensis strain VV3]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENTDMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQITHRSSSIQNSVLRNKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=202943 BK049_RS16155 WP_008358592.1 3162427..3163230(+) (spo0A) [Bacillus xiamenensis strain VV3]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGACAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCATATAATGGTCAGGAGTGTCTGACATTATTTAAAGATAAAGAGCCGGACGTTCTTC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGACTTCGTGAAAACACTGATATGACCAAGCAG
CCAAGTGTGATTATGCTAACGGCGTTTGGGCAAGAAGATGTAACGAAAAAAGCAGTCGATTTAGGCGCATCCTATTTCAT
TTTAAAGCCATTTGATATGGAAAACTTAGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAATCACCCATCGAT
CTTCTTCTATCCAAAACAGTGTCCTTCGTAACAAACCTGAACCTAAACGTAAAAACTTAGATGCGAGCATTACGACGATT
ATTCATGAAATTGGCGTGCCAGCTCATATTAAAGGATATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGACAT
TGAACTTCTCGGCAGTATCACAAAAGTATTGTATCCAGACATTGCGAAGAAATTTAACACGACAGCCAGCAGAGTAGAAC
GAGCCATTCGTCATGCCATTGAAGTTGCTTGGAGCAGAGGGAACATTGATTCCATTTCCTCACTCTTTGGTTACACAGTC
AGTATGTCAAAAGCCAAACCGACCAATTCAGAATTTATTGCTATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCTAG
CTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884


Multiple sequence alignment