Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | BK049_RS07645 | Genome accession | NZ_CP017786 |
| Coordinates | 1522646..1525081 (-) | Length | 811 a.a. |
| NCBI ID | WP_008356478.1 | Uniprot ID | - |
| Organism | Bacillus xiamenensis strain VV3 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1517646..1530081
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BK049_RS07620 (BK049_07620) | ispF | 1517653..1518129 (-) | 477 | WP_007496273.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
| BK049_RS07625 (BK049_07625) | ispD | 1518133..1518822 (-) | 690 | WP_008356486.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| BK049_RS07630 (BK049_07630) | - | 1518836..1519936 (-) | 1101 | WP_008356484.1 | PIN/TRAM domain-containing protein | - |
| BK049_RS07635 (BK049_07635) | disA | 1520091..1521170 (-) | 1080 | WP_008356482.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| BK049_RS07640 (BK049_07640) | radA | 1521173..1522552 (-) | 1380 | WP_071168236.1 | DNA repair protein RadA | Machinery gene |
| BK049_RS07645 (BK049_07645) | clpC | 1522646..1525081 (-) | 2436 | WP_008356478.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| BK049_RS07650 (BK049_07650) | - | 1525078..1526169 (-) | 1092 | WP_071168237.1 | protein arginine kinase | - |
| BK049_RS07655 (BK049_07655) | - | 1526174..1526731 (-) | 558 | WP_034738425.1 | UvrB/UvrC motif-containing protein | - |
| BK049_RS07660 (BK049_07660) | - | 1526746..1527210 (-) | 465 | WP_008356472.1 | CtsR family transcriptional regulator | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90023.79 Da Isoelectric Point: 6.2474
>NTDB_id=202912 BK049_RS07645 WP_008356478.1 1522646..1525081(-) (clpC) [Bacillus xiamenensis strain VV3]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGASAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVEESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDEGQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIAEEGVDLEYGARPLRRAIQKHVEDRLSEELLKGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=202912 BK049_RS07645 WP_008356478.1 1522646..1525081(-) (clpC) [Bacillus xiamenensis strain VV3]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTTGGCCATAA
GAATATTGGAACAGAGCACATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCGATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCTATGGATGAAGCAAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTTGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCAAAT
ACACCAACTTTAGATAGTCTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAACGTGTTATTGAGGTTTTAAGTAGAAGAACAAAGAATAACCCTGTGCTGATTGGGGAGCCTGGTGTTG
GTAAAACAGCCATTGCAGAAGGTCTGGCGCAGCAAATTATTCACAACGAAGTGCCTGAAATCCTTCGTGATAAACGAGTG
ATGACACTTGATATGGGAACCGTAGTTGCGGGAACGAAATATCGCGGGGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATCGGTGCAGGTGGAGCAGAGGGTG
CGATTGACGCGTCTAATATTCTGAAACCATCCTTGGCACGTGGTGAGCTTCAATGTATCGGGGCTACAACGTTAGATGAG
TACCGTAAATACATTGAGAAGGATGCTGCGCTTGAACGCCGATTCCAGCCAATTCAAGTCGATCAACCGTCTGTTGAAGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCGATTACAGATGAAGCCATTGAAG
CGGCGGTAAAGCTTTCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTGCGTTCTTTCACAACACCGCCGAACCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTTCGTAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGTGATACAGAGCAGCGCTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCGTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCGATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACGGAAACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCCCGCGTCATTGGACAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCAGTGAGACGTGCCCGTGCTGGTCTAAAAG
ATCCGAAGCGTCCGATTGGCTCCTTTATTTTCTTAGGTCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCTGAATACATGGAAAAACACTCTACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTTGGCTATGATGAGGGCGGCCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTGTTAGATGAGATTGAAAAGGCGCATCCTGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGATGGCCGTCTC
ACTGATTCTAAAGGACGTACTGTTGACTTTAGAAATACAATTTTGATCATGACTTCAAACGTTGGAGCTAGTGAATTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTTGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTAACAAAACGATTAAAAGAGCAAGACCTTTCAATCGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCTGAGGAAGGCGTAGACCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TTGAGGATCGACTTTCTGAGGAATTGCTGAAGGGCAATATTGAAAAGGGTCAACATATTGTATTAGATGTAGAAGATGGG
GAAATTGTCGTAAAAGCTACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTTGGCCATAA
GAATATTGGAACAGAGCACATTTTACTTGGTCTTGTACGTGAAGGTGAGGGCATCGCCGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAGAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCGATTCCTCAT
TATACGCCTAGAGCGAAGAAGGTCACTGAGCTTTCTATGGATGAAGCAAGAAAGCTTGGTCATTCCTATGTAGGGACAGA
ACATATTCTTTTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGTGTCTTAAATAACCTCGGAGTGAGCTTAAATA
AAGCACGCCAGCAAGTATTGCAGCTTCTTGGCAGCAATGAAACGGGTGCATCTGCGGCAGGATCTAATAGCAATGCAAAT
ACACCAACTTTAGATAGTCTGGCAAGAGACTTAACGGCTATTGCGAAAGAGGACAGCTTGGACCCTGTCATTGGACGAAG
CAAAGAAATTCAACGTGTTATTGAGGTTTTAAGTAGAAGAACAAAGAATAACCCTGTGCTGATTGGGGAGCCTGGTGTTG
GTAAAACAGCCATTGCAGAAGGTCTGGCGCAGCAAATTATTCACAACGAAGTGCCTGAAATCCTTCGTGATAAACGAGTG
ATGACACTTGATATGGGAACCGTAGTTGCGGGAACGAAATATCGCGGGGAATTCGAGGATCGTTTGAAAAAAGTCATGGA
CGAAATTCGTCAGGCTGGAAATATCATTCTCTTCATTGATGAGCTTCATACACTGATCGGTGCAGGTGGAGCAGAGGGTG
CGATTGACGCGTCTAATATTCTGAAACCATCCTTGGCACGTGGTGAGCTTCAATGTATCGGGGCTACAACGTTAGATGAG
TACCGTAAATACATTGAGAAGGATGCTGCGCTTGAACGCCGATTCCAGCCAATTCAAGTCGATCAACCGTCTGTTGAAGA
AAGTATTCAAATCTTAAGAGGGCTTAGAGACCGTTATGAAGCACATCACCGTGTGTCGATTACAGATGAAGCCATTGAAG
CGGCGGTAAAGCTTTCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTTTGCGTTCTTTCACAACACCGCCGAACCTAAAGGAACTTGAGCAAAAGCTGGATGAAGTTCGTAAGGA
AAAGGATGCGGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCTCTTCGTGATACAGAGCAGCGCTTGCGTGAAAAAG
TAGAAGTGACAAAGAAATCGTGGAAAGAAAAGCAGGGACAAGAGAATTCAGAGGTATCTGTAGATGATATTGCGATGGTT
GTCTCTAGCTGGACGGGAGTGCCTGTTTCAAAAATTGCCCAAACGGAAACAGATAAGCTTCTGAATATGGAACAATTGCT
CCACTCCCGCGTCATTGGACAGGATGAAGCGGTTGTCGCTGTAGCAAAAGCAGTGAGACGTGCCCGTGCTGGTCTAAAAG
ATCCGAAGCGTCCGATTGGCTCCTTTATTTTCTTAGGTCCAACAGGTGTTGGTAAGACTGAGCTTGCAAGAGCACTCGCC
GAGTCTATTTTCGGTGATGAAGAAGCGATGATCCGTATTGATATGTCTGAATACATGGAAAAACACTCTACTTCAAGACT
TGTTGGATCACCTCCAGGCTATGTTGGCTATGATGAGGGCGGCCAGCTGACTGAAAAAGTGAGAAGAAAGCCGTATTCTG
TCGTGCTGTTAGATGAGATTGAAAAGGCGCATCCTGATGTGTTTAATATCTTACTGCAAGTGTTAGAAGATGGCCGTCTC
ACTGATTCTAAAGGACGTACTGTTGACTTTAGAAATACAATTTTGATCATGACTTCAAACGTTGGAGCTAGTGAATTGAA
GCGCAATAAATATGTTGGCTTTAACGTGCAGGATGAAGGTCAAAATTACAAAGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCAGAGTTCATCAACCGTATTGATGAAATCATTGTCTTCCACTCACTTGAAAAGAAACATCTA
AAAGAGATTGTGTCTCTCATGTCTGATCAATTAACAAAACGATTAAAAGAGCAAGACCTTTCAATCGAATTGACGGAAGC
AGCAAAAGCGAAGATTGCTGAGGAAGGCGTAGACCTTGAGTATGGTGCTCGTCCGTTAAGAAGAGCGATTCAAAAGCACG
TTGAGGATCGACTTTCTGAGGAATTGCTGAAGGGCAATATTGAAAAGGGTCAACATATTGTATTAGATGTAGAAGATGGG
GAAATTGTCGTAAAAGCTACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.054 |
100 |
0.961 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.383 |
99.877 |
0.493 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae Rx1 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae D39 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.679 |
99.877 |
0.456 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
48.948 |
87.916 |
0.43 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae Rx1 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae D39 |
52.558 |
79.531 |
0.418 |
| clpE | Streptococcus pneumoniae R6 |
52.558 |
79.531 |
0.418 |