Detailed information NTG0202906

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: CJZ70_RS20230
• Genome accession: NZ_CP022890
• Coordinates: 3860777..3861889 (-)
• Length: 370 a.a.
• NCBI ID: WP_014478578.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain DKU_NT_02
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3855777..3866889

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CJZ70_RS20215 (CJZ70_20215)	gyrA	3855867..3858332 (-)	2466	WP_003244540.1	DNA topoisomerase (ATP-hydrolyzing) subunit A	-
CJZ70_RS20220 (CJZ70_20220)	gyrB	3858543..3860459 (-)	1917	WP_003226808.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
CJZ70_RS20225 (CJZ70_20225)	remB	3860514..3860759 (-)	246	WP_003219266.1	extracellular matrix regulator RemB	-
CJZ70_RS20230 (CJZ70_20230)	recF	3860777..3861889 (-)	1113	WP_014478578.1	DNA replication/repair protein RecF	Machinery gene
CJZ70_RS20235 (CJZ70_20235)	rlbA	3861905..3862120 (-)	216	WP_003226810.1	ribosome maturation protein RlbA	-
CJZ70_RS20240 (CJZ70_20240)	dnaN	3862251..3863387 (-)	1137	WP_003226811.1	DNA polymerase III subunit beta	-
CJZ70_RS20245 (CJZ70_20245)	dnaA	3863576..3864916 (-)	1341	WP_003242674.1	chromosomal replication initiator protein DnaA	-
CJZ70_RS20250 (CJZ70_20250)	rpmH	3865543..3865677 (+)	135	WP_003178075.1	50S ribosomal protein L34	-
CJZ70_RS20255 (CJZ70_20255)	rnpA	3865829..3866179 (+)	351	WP_014481515.1	ribonuclease P protein component	-

Sequence

Protein

• Length: 370 a.a.
• Molecular weight: 42304.34 Da
• Isoelectric Point: 7.3660

>NTDB_id=202906 CJZ70_RS20230 WP_014478578.1 3860777..3861889(-) (recF) [Bacillus subtilis strain DKU_NT_02]
MYIQNLELSSYRNYDHAELQFENKVNVIIGENAQGKTNLMEAIYVLSMAKSHRTSNDKELIRWDKDYAKIEGRVMKQNGA
IPMQLVISKKGKKGKVNHIEQQKLSQYVGALNTIMFAPEDLNLVKGSPQVRRRFLDMEIGQVSPVYLHDLSLYQKILSQR
NHFLKQLQTRKQTDRTMLDVLTDQLIEVAAKVVVKRLQFTAQLEKWAQPIHAGISRGLEELTLKYHTALDVSDPLDLSKI
GDSYQEAFSKLREKEIERGVTLSGPHRDDVLFYVNGRDVQTYGSQGQQRTTALSLKLAEIDLIHEEIGEYPILLLDDVLS
ELDDYRQSHLLHTIQGRVQTFVTTTSVDGIDHETLRQAGMFRVQNGALVK

Nucleotide

• Length: 1113 bp

>NTDB_id=202906 CJZ70_RS20230 WP_014478578.1 3860777..3861889(-) (recF) [Bacillus subtilis strain DKU_NT_02]
TTGTATATCCAGAACTTAGAACTTTCATCTTACCGCAACTACGACCATGCTGAACTTCAATTTGAAAATAAAGTAAATGT
GATCATCGGAGAAAACGCCCAGGGGAAGACAAACCTCATGGAGGCGATCTATGTCTTGTCCATGGCGAAATCGCACCGGA
CATCAAATGACAAAGAACTTATACGGTGGGACAAAGACTATGCTAAAATAGAGGGAAGAGTGATGAAGCAAAACGGGGCG
ATCCCGATGCAGCTCGTCATCTCCAAAAAGGGTAAAAAGGGCAAGGTCAATCATATTGAACAGCAAAAGCTCAGCCAGTA
TGTCGGGGCCCTCAACACCATTATGTTCGCGCCGGAAGATTTAAATCTTGTAAAGGGAAGCCCTCAAGTGAGAAGGCGGT
TTCTTGACATGGAAATTGGACAGGTTTCTCCCGTCTATCTTCATGATCTTTCTCTTTACCAGAAAATCCTTTCCCAGCGG
AATCATTTTTTGAAACAGCTGCAAACAAGAAAACAAACTGACCGGACGATGCTCGATGTTCTGACCGATCAGCTTATAGA
AGTTGCAGCAAAAGTCGTCGTAAAACGCCTGCAGTTTACAGCACAGCTCGAGAAATGGGCGCAGCCCATCCATGCAGGCA
TCTCAAGAGGGCTTGAAGAACTTACCCTGAAATACCATACAGCTCTTGATGTATCAGATCCCCTAGATTTGTCGAAAATA
GGAGATAGCTATCAAGAAGCGTTTTCTAAATTAAGAGAAAAAGAAATTGAGCGTGGTGTGACGCTGTCAGGGCCTCATCG
CGATGATGTTCTTTTCTATGTGAACGGACGCGATGTGCAGACGTATGGTTCTCAAGGACAGCAGCGAACGACGGCGTTGT
CCCTTAAGCTGGCGGAGATTGACCTGATCCATGAAGAAATCGGAGAATATCCCATTTTACTATTGGATGATGTACTGAGT
GAACTGGATGATTATCGCCAGTCACACTTGCTTCATACGATCCAAGGCCGTGTACAAACGTTTGTCACAACGACAAGCGT
TGATGGCATTGATCACGAAACCTTACGTCAAGCAGGAATGTTCCGTGTGCAAAATGGTGCGTTAGTGAAGTGA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-350)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	99.459	100	0.995
recF	Streptococcus pneumoniae R6	45.628	98.919	0.451